Job Description P0AC59 Confidence 99.97% Date Thu Jan 5 11:17:15 GMT 2012 Rank 5 Aligned Residues 181 % Identity 16% Template c3lykA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:stringent starvation protein a homolog; PDBTitle: structure of stringent starvation protein a homolog from2 haemophilus influenzae Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		K	L	Y	I	Y	D	H	C	P	Y	C	L	K	A	R	M	I	F	G	L	K	N	I	P	V	E	L	H	V	L	L	N	.	D	D	A	E	T	P	T	R	M	V	G	Q	K	Q	V	P	I	L	Q	K	D	D	S	R	Y	M	P	E	S	M	D	I	V	H	Y	V	D	K	L	D	G	K	P	L	L	T	G
Query Conservation																																		.
Alig confidence																																		.																					.
Template Conservation																																																							.
Template Sequence		T	L	F	S	N	K	D	D	I	Y	C	H	Q	V	K	I	V	L	A	E	K	G	V	L	Y	E	N	A	E	V	D	L	Q	A	L	P	E	D	L	X	E	L	N	P	Y	G	T	V	P	T	L	V	D	.	R	D	L	V	L	F	N	S	R	I	I	X	E	Y	L	D	E	R	F	P	H	P	P	L	X	Q
Template Known Secondary structure							T	T															T										T	T	S										T	T			S						.	T	T					S												S		S	S			S
Template Predicted Secondary structure																																																							.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		K	R	S	P	A	I	E	E	W	L	R	K	V	N	G	Y	A	N	K	L	L	L	P	R	F	A	K	S	A	F	D	E	F	S	T	P	A	A	R	K	Y	F	V	D	K	K	E	A	S	A	G	N	F	A	D	L	L	A	H	S	D	G	L	I	K	N	I	S	D	D	L	R	A	L	D	K	L	I	V	.
Query Conservation																																																																																	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	P	V	S	R	A	K	D	R	L	L	X	L	R	I	E	Q	D	W	Y	P	T	L	A	K	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	T	E	K	E	K	T	S	A	L	K	Q	L	K	E	E	L	L	G	I	A	P	I	F	Q	Q
Template Known Secondary structure		S	S																		T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S																			T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																										.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		K	P	N	A	V	N	G	E	L	S	E	D	D	I	Q	L	F	P	L	L	R	N	L	T	L	V	A	.	.	.	G	I	N	W	P	S	R	V	A	D	Y	R	D	N	M	A	K	Q	T	Q	I	N
Query Conservation																													.	.	.
Alig confidence																													.	.	.
Template Conservation
Template Sequence		X	P	Y	F	X	N	E	E	F	G	L	V	D	C	Y	V	A	P	L	L	W	K	L	K	H	L	G	V	E	F	T	G	T	G	S	K	A	I	K	A	Y	X	E	R	V	F	T	R	D	S	F	L
Template Known Secondary structure		S	S	B	T	T	B	S	S																	T	T	T					S	T	T													T	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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