 |
Job Description | P0AC59 | Confidence | 45.08% | Date | Thu Jan 5 11:17:15 GMT 2012 |
Rank | 250 | Aligned Residues | 74 |
% Identity | 11% | Template | c2dizA_ |
PDB info |
PDB header:electron transport | Chain: A: PDB Molecule:thioredoxin domain-containing protein 5; |
PDBTitle: the solution structure of the third thioredoxin domain of2 human thioredoxin domain-containing protein 5
|
Resolution | UNK |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | |
|
|
|
|
|
60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
| . |
|
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | I | Y | D | H | C | P | Y | C | L | K | A | R | M | I | F | G | L | K | . |
. |
. |
. |
. |
. |
. |
N | I | P | V | E | L | H | V | L | L | N | D | D | A | E | T | P | T | R | M | V | G | Q | K | Q | V | P | I | L | Q | K | . |
D | D | S | R | Y | M | . |
. |
. |
. |
. |
. |
P | E | S | M | D | I | V | H | Y |
Query Conservation |   |
|
|   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|   |   |   | . | . | . | . | . | . | . |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   | . |   |
|
|   |   |
| . | . | . | . | . | . |   |
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
K | F | Y | A | P | W | C | G | H | C | K | T | L | A | P | T | W | E | E | L | S | K | K | E | F | P | G | L | A | G | V | K | I | A | E | V | D | C | T | A | E | R | N | I | C | S | K | Y | S | V | R | G | Y | P | T | L | L | L | F | R | G | G | K | K | V | S | E | H | S | G | G | R | D | L | D | S | L | H | R | F |
Template Known Secondary structure |   |
 |  |  |
| T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | S |
|
|
|  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  | T | T |
|
| S | S | S |  |  |  |
| B | B | S | S | S | B |
|
|
|
|
| S |
|
| S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
  |   |
69 | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | K | L | D | G | K | P |
Query Conservation |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
V | L | S | Q | A | K | D | E |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|