Job Description P0AC59 Confidence 99.95% Date Thu Jan 5 11:17:15 GMT 2012 Rank 42 Aligned Residues 205 % Identity 12% Template c1k0dB_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:ure2 protein; PDBTitle: ure2p in complex with glutathione Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																							.	.
Query SS confidence																																		.	.	.	.																							.	.
Query Sequence		M	K	L	Y	I	Y	D	H	C	P	Y	C	L	K	A	R	M	I	F	G	L	K	N	I	P	V	E	L	H	V	L	L	.	.	.	.	N	D	D	A	E	T	P	T	R	M	V	G	Q	K	Q	V	P	I	L	Q	K	D	.	.	D	S	R	Y	M	P	E	S	M	D	I	V	H	Y	V	D	K	L	D	G
Query Conservation																																		.	.	.	.																							.	.
Alig confidence																																		.	.	.	.																							.	.
Template Conservation
Template Sequence		Y	T	L	F	S	H	R	S	A	P	N	G	F	K	V	A	I	V	L	S	E	L	G	F	H	Y	N	T	I	F	L	D	F	N	L	G	E	H	R	A	P	E	F	V	S	V	N	P	N	A	R	V	P	A	L	I	D	H	G	M	D	N	L	S	I	W	E	S	G	A	I	L	L	H	L	V	N	K	Y	Y
Template Known Secondary structure								T	T														T	T										G	G	G	T	G	G	G	S								T	T			S						G	G	G	T	S					S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
					75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	K	P	L	L	T	G	K	R	S	P	A	I	E	E	W	L	R	K	V	N	G	Y	A	N	K	L	L	L	P	R	F	A	K	S	A	F	D	E	F	S	T	P	A	A	R	K	Y	F	V	D	K	K	E	A	S	A	G	N	F	A	D	L	L	A	H	S	D	G	L	I	K	N	I	S	D	D	L
Query Conservation		.	.	.
Alig confidence		.	.	.																																															.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.
Template Sequence		K	E	T	G	N	P	L	L	W	S	D	D	L	A	D	Q	S	Q	I	N	A	W	L	F	F	Q	T	S	G	H	A	P	M	I	G	Q	A	L	H	F	R	Y	F	H	S	Q	K	I	A	.	.	.	.	.	.	.	S	A	V	E	R	Y	T	D	E	V	R	R	V	Y	G	V	V	E	M	A	L	A	E	R
Template Known Secondary structure					S			T	T	S		S																			T													T	S	S	S				.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.								.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		R	A	L	D	K	L	I	V	K	P	N	A	V	N	G	E	L	S	E	D	D	I	Q	L	F	P	L	L	R	N	L	T	L	V	A	G	.	.	I	N	W	P	S	R	V	A	D	Y	R	D	N	M	A	K	Q	T	Q	I	N	L	L	S	S
Query Conservation																																						.	.
Alig confidence																																						.	.
Template Conservation
Template Sequence		R	E	A	L	V	M	D	Y	P	V	W	L	V	G	D	K	L	T	I	A	D	L	A	F	V	P	W	N	N	V	V	D	R	I	G	I	N	I	K	I	E	F	P	E	V	Y	K	W	T	K	H	M	M	R	R	P	A	V	I	K	A	L	R
Template Known Secondary structure													S	B	T	T	B							T	T					T	T	G	G	G	G	T																			T	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions