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Job DescriptionP0AC59
Confidence99.92%DateThu Jan 5 11:17:15 GMT 2012
Rank83Aligned Residues183
% Identity14%Templatec1bg5A_
PDB info PDB header:ankyrin bindingChain: A: PDB Molecule:fusion protein of alpha-na,k-atpase with PDBTitle: crystal structure of the ankyrin binding domain of alpha-na,2 k-atpase as a fusion protein with glutathione s-transferase
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.. .......50.........60.........70......
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Query Sequence  KLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRM. . . . . VGQKQVPILQKDDSRYMPESMDIVHYVDKLDGKP
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Template Sequence  ILGYWKIKGLVQPTRLLLEYLEEKYEEHLYERDEGDKWRNKKFELGLEFPNLPYYIDGD. VKLTQSMAIIRYIADKHNML
Template Known Secondary structure  B

S
S
STTTTT


B




GGGTTTTT

SS

SSB


SS.


BSTTS
S
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   4.....10.........20.........30.........40.........50.........60.. .......70.........80..
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  LLTGKRSPAIEEWLRKVNGYANKLLLPRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDK
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Template Sequence  GGCPKERAEISMLEGAVLDIRYGVSRIAYS. . . . . . . . . . . . . . . . . . . . . . . . . . . KDFETLKVDFLSKLPEMLKMFED
Template Known Secondary structure 
SSTTTSSS...........................TT
SSSSTTTTTTSTTTSTTTTT
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   83......90.........100.........110.. .......120.........130.....
 
   157.. 160.........170.........180..... ....190.........200.........210..
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Query Sequence  LIV. KPNAVNGELSEDDIQLFPLLRNLTLV. . AGINWPSRVADYRDNMAKQTQINLLSS
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Template Sequence  RLCHKTYLNGDHVTHPDFMLYDALDVVLYMDPMCLDAFPKLVCFKKRIEAIPQIDKYLK
Template Known Secondary structure  TTTTSSSSSSSS

TTTSSTTT
TTTTTS
TS
ST
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   136...140.........150.........160.........170.........180.........190....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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