Job Description P75810 Confidence 5.41% Date Thu Jan 5 12:14:27 GMT 2012 Rank 11 Aligned Residues 209 % Identity 15% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	R	N	A	L	K	R	R	T	W	A	L	F	M	F	F	F	L	P	G	L	L	M	A	S	W	A	T	R	T	P	A	I	R	D	I	L	S	V	S	I	A	E	M	G	G	V	L	F	G	L	S	I	G	S	M	S	G	I	L	C	S	A	W	L	V	K	R	F	G	T	R	N	V	I	L	V	T	M
Query Conservation
Alig confidence																																.	.	.	.	.																																			.	.
Template Conservation																																.	.	.	.	.																																			.	.
Template Sequence		Q	P	I	E	S	D	A	T	S	D	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	.	.	.	.	.	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	.	.	G	K	A	S	I	V	D	M	A
Template Known Secondary structure		S																													T	.	.	.	.	.	T	S		G	G	G																											T	T	.	.	T
Template Predicted Secondary structure																																.	.	.	.	.																																			.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	C	A	L	I	G	M	M	I	L	S	L	A	L	W	L	T	S	P	L	L	F	A	V	G	L	G	V	F	G	A	S	F	G	S	A	E	V	A	I	N	V	E	G	A	A	V	E	R	E	M	N	K	T	V	L	P	M	M	H	G	F	Y	S	L	G	T	L	A	G	A	G	V	G	M	A	L	T	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	A	L	A	G	G	V	A	I	G	S	V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V
Template Known Secondary structure				T	T							T	T	T	T	T	T	S																						T									S					T	T						T	T														S	T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	P	A	T	V	H	I	L	L	A	A	L	V	G	I	A	P	I	Y	I	A	I	Q	A	I	P	D	G	T	G	K	N	A	A	D	G	T	Q	H	G	E	K	G	V	P	F	Y	R	D	I	Q	L	L	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E	H	K	A	E	R	L	V
Template Known Secondary structure																											T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions