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Job DescriptionP75810
Confidence24.96%DateThu Jan 5 12:14:27 GMT 2012
Rank6Aligned Residues207
% Identity12%Templatec2jlnA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:mhp1; PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30....... ..40.........50.........60.......
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Query Sequence  TVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPA. . . . . . . . . . . . . . IRDILSVSIAEMGGVLFGLSIGSMSGILCS
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Template Sequence  DPNASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPA
Template Known Secondary structure 
TT

S
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T


TT
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   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   68 .70.........80.........90.........100.........110.........120.........130.......
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Query Sequence  A. . . . . . . . . . WLVKRFGTRNVILVTMSCALIGMMILSLALWLTSPLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNK
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Template Sequence  ANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYR
Template Known Secondary structure  TSTTT

T
GGGTTTTTSTT


TB
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   317..320.........330.........340.........350.........360.........370.........380.........390......
 
   138.140.........150.........160.........170.........180.........190.........200........
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Query Sequence  TVLPMMHGFYSLGTLAGAGVGMALTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKG
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Template Sequence  TKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLFSEAESRNEDYLR
Template Known Secondary structure  SSSTT
TBTTB
T
GGGTTTS
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GGGGGS
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   397..400.........410.........420.........430.........440.........450.........460.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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