Return to main results Retrieve Phyre Job Id

Job DescriptionP69910
Confidence99.62%DateThu Jan 5 12:12:18 GMT 2012
Rank204Aligned Residues365
% Identity14%Templated7aata_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.... .....70.........80...... ...90.........100.........110
Predicted Secondary structure 











......










.


Query SS confidence 


























. . . . . .





















.























Query Sequence  RDDVAFQIINDELYLDGNARQNLATFC. . . . . . QTWDDENVHKLMDLSINKNWID. KEEYPQSAAIDLRCVNMVADLWHA
Query Conservation          
 
 
  
          
...... 
     
  
       
   .    
    

   
  

 
   
Alig confidence 


























......





















.























Template Conservation 
 
 
               
 
 

             

  
            
    
   

 


         
Template Sequence  PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSE
Template Known Secondary structure 





TT




S


TTS




TT






TT


TT
Template Predicted Secondary structure 







































Template SS confidence 















































































   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   111........120.........130.........140.........150.........160.........170.........180.. .......
Predicted Secondary structure 



















.




Query SS confidence 







































































.






Query Sequence  PAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPM. RPGQLFM
Query Conservation 
        
  
 
 


 
 
  


          
       

    
 
  


   
     

 .       
Alig confidence 



.
























.........
































.






Template Conservation      .       
 
  

       
   .........   

 


  
 
          
  
             
Template Sequence  AFKS. GRYVTVQGISGTGSLRVGANFLQRF. . . . . . . . . FKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL
Template Known Secondary structure  T.T
.........
TT

S

TTTT

TTTT
Template Predicted Secondary structure 



.



.........



















Template SS confidence 















































































   94... ..100.........110.........120.. .......130.........140.........150.........160...
 
   190.........200. ........210......... 220.........230.........240.........250. ........260..
Predicted Secondary structure 




...











...







.










Query SS confidence 











. . .

















. . .































.










Query Sequence  DPKRMIEACDEN. . . TIGVVPTFGVTYTGNYEF. . . PQPLHDALDKFQADTGIDIDMHIDAASGGFLA. PFVAPDIVWDF
Query Conservation 
   
   
   ...
  

   


  
  

...
 

  
     
    

 





 

   . 
       
 
Alig confidence 











...

















...











......













.










Template Conservation 
       
         
    
 



   
      
   
    ......  

 

 
                 
Template Sequence  DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRN. . . . . . LLAYFDMAYQGFASGDINRDAWALRH
Template Known Secondary structure 
TTS
TT
SSS
TTT




TT......
S
TTTTTS
T
Template Predicted Secondary structure 




















......














Template SS confidence 















































































   169170.........180.........190.........200.........210...... ...220.........230.........240..
 
   263..... .270...... ...280.........290.. .......300.........310.........320.........330 .
Predicted Secondary structure 





..

.








.....



















...
Query SS confidence 





. .







.















. . . . .





































. . .
Query Sequence  RLPRVK. . SISASGHK. FGLAPLGCGWVIWRDE. . . . . EALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYE. . . F
Query Conservation      

..


 
 

.    
 
 
 

 
  .....  
         


      

  

     
     ...
Alig confidence 





..







.















.....













.......
















...
Template Conservation          
   
 

  
  
 


                  
       .......        
      
     
Template Sequence  FIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPM. . . . . . . YSNPPMNGARIASLILNTPEL
Template Known Secondary structure  TT



TTTS

GGG

SS.......SS


Template Predicted Secondary structure 






















.......





Template SS confidence 















































































   243......250.........260.........270.........280.........290.... .....300.........310.....
 
   332.......340.........350.........360.........370.........380.........390.........400.........410.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  LRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTL
Query Conservation    

  
          

  
   
      

         
 

 
              
   
   
  

   
Alig confidence 














































.........






















.
Template Conservation                    
  
   
                
 
  .........  
       

 
  
 
  
 .
Template Sequence  RKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCF. . . . . . . . . TGLKPEQVERLTKEFSIYMTKDG.
Template Known Secondary structure  TT

S



SS.........






TT
.
Template Predicted Secondary structure 









.........








.
Template SS confidence 















































































   316...320.........330.........340.........350.........360.. .......370.........380.....
 
   412.......420.........430.........440......
Predicted Secondary structure 











Query SS confidence 


































Query Sequence  GGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLK
Query Conservation 
        




    
   

  
 

     
Alig confidence  ..........




.


















Template Conservation  ..........


 
. 
    

 
  

  


Template Sequence  . . . . . . . . . . RISVA. GVASSNVGYLAHAIHQVTK
Template Known Secondary structure  ..........GG.G

TTT
Template Predicted Secondary structure  ...........



Template SS confidence 


































   386...390 .........400.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions