Return to main results Retrieve Phyre Job Id

Job DescriptionP69910
Confidence100.00%DateThu Jan 5 12:12:18 GMT 2012
Rank13Aligned Residues396
% Identity15%Templated2z67a1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases SepSecS-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60. ........70....
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Query Sequence  MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLA. . . . . . TFCQTWDDENVHK
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Template Sequence  LIPKNXEKRGELVLNEY. . LKEIEDVFNHRKIPENGIDDEKIKLFLKFLSXXDTDKDPKSVRIGEREARTYSKIHEELSS
Template Known Secondary structure  SS
..T
S

SS


TTBGGG
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S
TT
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   910.........20..... ....30.........40.........50.........60.........70.........80......
 
   75....80.........90... ......100.........110.........120.........130.........140........
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Query Sequence  LMDLSINKNWIDKEEYPQS. . . . . . AAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAA
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Template Sequence  GFCHGIGRSGNLVDPQPKASGASIXYALTNKILESFFKQLGLNVH. . . AIATPISTGXSISLCLSAARKKYG. . . . . . . .
Template Known Secondary structure  T
TT
BSBTTBTTS

TTBTT


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   87..90.........100.........110.........120.........130. ........140.........150.....
 
   149150.........160.........170.........180. ........190.........200 .........210.........220.
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Query Sequence  GKPTDKPNLVCGPVQICWHKFARYWDVELREIP. . MRPGQLFMDPKRMIEACDE. . . . . NTIGVVPTFGVTYTGNYEFPQ
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Template Sequence  . . . . SNVVIYPYASHKSPIKAVSFVGXNXRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIV
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TT


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TTB



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   156...160.........170.........180.........190.........200.........210.........220.........230.
 
   222.......230.........240.........250.........260.........270.........280.........290.........300.
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Query Sequence  PLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVF
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Template Sequence  EIAKICENYD. . . . . . IPHIINGAYAIQNNYY. . LEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISL.
Template Known Secondary structure  T......


TTTTT
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   232.......240. ........250....... ..260.........270.........280.........290.........300..
 
   302.......310.........320.........330.........340.........350.........360 .........370........
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Query Sequence  NVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKL. . . GPYEFICTGRPDEGIPAV
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Template Sequence  . . . . . . . . . . . . SYPGRASATPVVNTLVSLLSXGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLD. . . . VESPIAS
Template Known Secondary structure  ............TS
S
B
SSS

B

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   303......310.........320.........330.........340.........350......... 360......
 
   379380.........390.........400.........410.... .....420.........430.........440....
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Query Sequence  CFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGE. . . . . . . . ATDIVVMRIMCRRGFEMDFAELLLEDYKAS
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Template Sequence  CIS. . . . . . VNSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVXNAAIGVRTEDIVNSVSKLEKI
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SS
TT

S

TT
T
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TT

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   367.. 370.........380.........390.........400.........410.........420.........430....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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