Job Description P69910 Confidence 99.70% Date Thu Jan 5 12:12:18 GMT 2012 Rank 188 Aligned Residues 355 % Identity 15% Template d2q7wa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.40

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		51	.	.	.	.	.	.	.		.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure										.							.	.	.	.	.	.																							.
Query SS confidence										.							.	.	.	.	.	.																							.
Query Sequence		Y	L	D	G	N	A	R	Q	.	N	L	A	T	F	C	.	.	.	.	.	.	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	.	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N
Query Conservation										.							.	.	.	.	.	.																							.
Alig confidence										.							.	.	.	.	.	.																							.																													.
Template Conservation																																																																										.
Template Sequence		N	I	T	A	A	P	A	K	I	N	L	G	I	G	V	Y	K	D	E	T	G	K	T	P	V	L	T	S	V	K	K	A	E	Q	Y	L	L	E	N	E	T	T	K	N	Y	L	G	I	D	G	I	P	E	F	G	R	C	T	Q	E	L	L	F	G	K	G	S	A	L	I	N	D	.	K	R	A	R	T	A	Q
Template Known Secondary structure		T										S	S			S				T	T	S																											T	T																T	T						T	.	T
Template Predicted Secondary structure																																																																										.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	.	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N
Query Conservation																																																														.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	G	G	T	G	A	L	R	V	A	A	D	F	L	A	K	N	.	.	.	.	.	.	.	.	.	.	T	S	V	K	R	V	W	V	S	N	P	S	W	P	N	H	K	S	V	F	N	S	A	G	L	E	V	R	E	Y	A	Y	Y	D	A	E	N	H	T	L	D	F	D	A	L	I	N	S	L	N	E	A
Template Known Secondary structure			S																	.	.	.	.	.	.	.	.	.	.	S										S			T									T	T											T	T	T	T												T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.											.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		202	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure				.	.	.																	.	.	.																																												.	.
Query SS confidence				.	.	.																	.	.	.																																												.	.
Query Sequence		T	I	.	.	.	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	.	.	R	L	P	R	V	K	S	I	S	A	S
Query Conservation				.	.	.																	.	.	.																																												.	.
Alig confidence				.	.	.																	.	.	.													.	.	.	.	.	.																										.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		Q	A	G	D	V	V	L	F	H	G	C	C	H	N	P	T	G	I	D	P	T	L	E	Q	W	Q	T	L	A	Q	L	S	V	E	K	G	.	.	.	.	.	.	W	L	P	L	F	D	F	A	Y	Q	G	F	A	R	G	L	E	E	D	A	E	G	L	R	A	F	A	A	M	H	K	E	L	I	V	A	S	S
Template Known Secondary structure			T	T								S	S		T	T	T																				T	.	.	.	.	.	.								S		T	T	S	S	S						T											S
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	.	.	.	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A
Query Conservation																																																										.	.	.
Alig confidence																							.	.																																		.	.	.
Template Conservation																							.	.
Template Sequence		Y	S	N	F	G	L	Y	N	E	R	V	G	A	C	T	L	V	A	A	D	S	.	.	E	T	V	D	R	A	F	S	Q	M	K	A	A	I	R	A	N	Y	S	N	P	P	A	H	G	A	S	V	V	A	T	I	L	S	N	D	A	L	R	A	I	W	E	Q	E	L	T	D	M	R	Q	R	I	Q	R	M	R
Template Known Secondary structure						S		G	G	G										S	S		.	.																T	T	T	S	S														T	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation																														.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.					.
Template Sequence		Q	L	F	V	N	T	L	Q	E	K	G	A	N	R	D	F	S	F	I	I	K	Q	N	G	M	F	S	F	.	.	.	.	.	.	.	.	.	S	G	L	T	K	E	Q	V	L	R	L	R	E	E	F	G	V	Y	A	V	A	S	G	.	.	.	.	.	.	.	.	.	.	.	R	V	N	V	.	A	G	M	T
Template Known Secondary structure											T	T			S			T							S	S				.	.	.	.	.	.	.	.	.																					T	T		.	.	.	.	.	.	.	.	.	.	.				G	.	G	G
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.					.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350										.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.												.	.	.	.		.	.	380	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	N	M	A	P	L	C	E	A	I	V	A	V	L
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions