Job Description P69910 Confidence 99.70% Date Thu Jan 5 12:12:18 GMT 2012 Rank 189 Aligned Residues 324 % Identity 15% Template d2cfba1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.85

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		53	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		D	G	N	A	R	Q	N	L	A	T	.	.	.	.	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																																				.	.	.	.													.	.	.	.	.	.
Template Conservation																																																			.	.	.	.													.	.	.	.	.	.
Template Sequence		D	G	N	Q	Y	I	D	Y	V	G	S	W	G	P	A	I	V	G	H	A	H	P	E	V	I	D	A	L	H	A	A	L	E	K	G	T	S	F	G	A	P	C	L	L	E	N	I	L	A	.	.	.	.	E	M	V	I	A	A	V	P	S	V	E	M	.	.	.	.	.	.	V	R	F	V	N	S	G	T	E
Template Known Secondary structure		T							S	S	T	T	T	T	T		T	T		B	T													T	T		S			S	S										.	.	.	.								S	S		S		.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																																			.	.	.	.													.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	.	.	.	E	N	T	I	G	V
Query Conservation																																																																									.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.												.	.	.	.	.	.											.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		A	C	M	A	V	L	R	L	M	R	A	Y	.	.	.	.	.	.	.	.	.	T	Q	R	E	K	V	I	K	F	E	G	C	Y	H	.	.	.	.	.	.	.	.	.	G	H	A	A	T	L	T	A	P	Y	N	.	.	.	.	.	.	D	L	E	A	V	S	R	L	F	E	Q	Y	P	N	D	I	A	G	V
Template Known Secondary structure														.	.	.	.	.	.	.	.	.		T									T				.	.	.	.	.	.	.	.	.										T	T	.	.	.	.	.	.												S	T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.										130	.	.	.	.	.	.	.	.	.	140							.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.													.	.	.	.	.	.													.	.	.																						.	.
Template Conservation																																.	.	.	.	.	.													.	.	.																						.	.
Template Sequence		I	L	E	P	V	V	G	N	A	G	F	I	P	P	D	A	G	F	L	E	G	L	R	E	L	T	K	Q	Y	G	.	.	.	.	.	.	A	L	L	V	F	D	E	V	M	T	G	F	.	.	.	R	I	A	Y	G	G	A	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	.	.	K	V	I	G	G	G
Template Known Secondary structure					S	S	B		S	S	S		B				T	T												T	T	.	.	.	.	.	.								T	T	T	T	T	.	.	.	T	T		T	T							T				S						.	.	G	G	G	G	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.													.	.	.																						.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.							.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	.	Q	V	A	A	Y	L	A	D	E	I	A	K	L
Query Conservation																																																																				.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	V	G	A	Y	G	G	R	A	E	I	M	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	V	A	P	A	G	P	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	I	L	S	R	P	G	S	Y	E	H	L	D	R	I	T	G	K	L	V	Q	G	L	L	D	A	A	R	E	F
Template Known Secondary structure		S													.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		T	T																						T	S	T	T																						T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.														270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.										390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.
Query Sequence		G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	.	.	.	.	.	.	.	.	.	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M
Query Conservation																															.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																		.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Template Sequence		G	H	E	V	C	G	G	.	.	.	.	.	H	I	S	G	M	F	G	L	F	F	T	A	G	P	V	T	N	Y	E	Q	A	K	Q	S	D	L	K	K	F	A	A	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	F	.	.	.	.	.	.	.	.	.	E	A	G	F	T	S	L	A	H	T	E
Template Known Secondary structure		T							.	.	.	.	.			T	T						S	S	S				S	S					T	T	S															T	T					S	S	T	T	.	.	.	.	.	.	.	.	.	S						T	T
Template Predicted Secondary structure									.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.										.	.	.	.	.	.	390	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	I	E	R	T	I	A	A	A	R	T	V	L	S	Q	L
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions