Job Description P69910 Confidence 99.78% Date Thu Jan 5 12:12:18 GMT 2012 Rank 155 Aligned Residues 348 % Identity 11% Template d2byla1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.15

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		53	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		D	G	N	A	R	Q	N	L	A	T	.	.	.	.	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																														.	.																				.	.	.	.	.	.	.
Template Conservation																																													.	.																				.	.	.	.	.	.	.
Template Sequence		E	G	R	K	Y	F	D	F	L	S	S	I	S	A	V	N	Q	G	H	C	H	P	K	I	V	N	A	L	K	S	Q	V	D	K	L	T	L	T	S	R	A	F	Y	.	.	N	N	V	L	G	E	Y	E	E	Y	I	T	K	L	F	N	Y	H	K	.	.	.	.	.	.	.	V	L	P	M	N	T	G	V	E
Template Known Secondary structure		T							S	S					T		T	T		B	T													T	T						T	T	S		.	.		S	S													T		S		.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																													.	.																				.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																			.																													.	.	.	.	.	.
Query SS confidence																																			.																													.	.	.	.	.	.
Query Sequence		A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	.	.	.	.	.	.	D	P	K	R	M	I	E	A	C	D	E	N
Query Conservation																																			.																													.	.	.	.	.	.
Alig confidence																		.	.																.																													.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		A	G	E	T	A	C	K	L	A	R	K	W	G	Y	T	V	.	.	K	G	I	Q	K	Y	K	A	K	I	V	F	A	A	G	N	F	W	G	R	T	L	S	A	I	S	S	S	T	D	P	T	S	Y	D	G	F	G	P	F	M	P	G	F	D	I	I	P	Y	N	D	L	P	A	L	E	R	A	L	Q	D	P
Template Known Secondary structure																	T	.	.	T				T	T								T	T						S					T	T								T	T	S		S			T	T						T	T										T	S	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.													.	.	.	.	.	.												.	.	.	.
Template Conservation																																					.	.	.	.	.	.												.	.	.	.
Template Sequence		N	V	A	A	F	M	V	E	P	I	Q	G	E	A	G	V	V	V	P	D	P	G	Y	L	M	G	V	R	E	L	C	T	R	H	Q	.	.	.	.	.	.	V	L	F	I	A	D	E	I	Q	T	G	.	.	.	.	L	A	R	T	G	R	W	L	A	V	D	Y	E	N	V	R	P	D	I	V	L	L	G	K
Template Known Secondary structure		T								S	S	B	T	T	T	T	S	B				T	T													T	.	.	.	.	.	.								T	T	T	T	.	.	.	.	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S						G
Template Predicted Secondary structure																																					.	.	.	.	.	.												.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.							.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	S	G	G	L	Y	P	V	S	A	V	L	C	D	D	D	I	M	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	I	K	P	G	E	H	F	S	T	Y	G	G	N	P	L	G	C	R	V	A	I	A	A	L	E	V	L	E	E	E	N	L	A	E	N	A	D	K	L	G	I	I	L	R	N	E
Template Known Secondary structure		G	G	G	T	T	S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		T	T	S	S			S	S	T	T																		T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.														.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L
Query Conservation
Alig confidence							.																						.	.	.	.																					.	.	.	.	.	.	.
Template Conservation							.																						.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		L	M	K	L	P	.	S	D	V	V	T	A	V	R	G	K	G	L	L	N	A	I	V	I	K	E	T	.	.	.	.	K	D	W	D	A	W	K	V	C	L	R	L	R	D	N	G	L	L	A	K	.	.	.	.	.	.	.	P	T	H	G	D	I	I	R	F	A	P	P	L	V	I	K	E	D	E	L	R	E
Template Known Secondary structure				T	S		.	T	T	T								T	T										.	.	.	.	S	S													T	T					.	.	.	.	.	.	.				T	T								T	T
Template Predicted Secondary structure							.																						.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.					.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.								.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		437	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	D	Y	K	A	S	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	E	I	I	N	K	T	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions