Job Description P69910 Confidence 99.96% Date Thu Jan 5 12:12:18 GMT 2012 Rank 42 Aligned Residues 361 % Identity 12% Template d2bkwa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.57

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	R	Q	N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G
Query Conservation
Alig confidence																															.	.	.	.	.																																.
Template Conservation																															.	.	.	.	.																																.
Template Sequence		K	S	V	D	T	L	L	I	P	G	P	I	I	L	S	G	A	V	Q	K	A	L	D	V	P	S	L	G	H	.	.	.	.	.	T	S	P	E	F	V	S	I	F	Q	R	V	L	K	N	T	R	A	V	F	K	S	A	A	A	S	K	S	Q	P	F	.	V	L	A	G	S	G	T	L	G	W	D	I	F	A
Template Known Secondary structure									S	S	S	S										T	T	S						T	.	.	.	.	.	T	S																		T	T			G	G	G	T					.				S		T	T
Template Predicted Secondary structure																															.	.	.	.	.																																.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																	.	.																																						.
Query SS confidence																																	.	.																																						.
Query Sequence		M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	.	.	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	.	I	G	V	V	P	T	F	G	V
Query Conservation																																	.	.																																						.
Alig confidence								.	.	.	.	.	.	.	.	.																	.	.																																						.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		S	N	F	I	L	S	.	.	.	.	.	.	.	.	.	K	A	P	N	K	N	V	L	V	V	S	T	G	T	F	S	D	R	F	A	D	C	L	R	S	Y	G	A	Q	V	D	V	V	R	P	L	K	I	G	E	S	V	P	L	E	L	I	T	E	K	L	S	Q	N	S	Y	G	A	V	T	V	T	H	V	D
Template Known Secondary structure					S		T	.	.	.	.	.	.	.	.	.	T		S									S	S													T	T									S	S	T	T	S														S			S						S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.										.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D
Query Conservation
Alig confidence																						.	.	.	.																			.	.	.	.	.	.	.																				.
Template Conservation																						.	.	.	.																			.	.	.	.	.	.	.																				.
Template Sequence		T	S	T	A	V	L	S	D	L	K	A	I	S	Q	A	I	K	Q	T	S	.	.	.	.	P	E	T	F	F	V	V	D	A	V	C	S	I	G	C	E	E	F	.	.	.	.	.	.	.	E	F	D	E	W	G	V	D	F	A	L	T	A	S	Q	A	I	G	A	.	P	A	G	L	S	I	S	L	C	S	S
Template Known Secondary structure		T	T	T	T																	.	.	.	.	T	T	S							T	T	T	T	T	T	S			.	.	.	.	.	.	.		T	T	T	T	T		S												.		S
Template Predicted Secondary structure																						.	.	.	.																			.	.	.	.	.	.	.																				.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.								.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.																.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	F	X	D	Y	A	L	N	D	S	K	N	G	H	V	H	G	Y	F	S	S	L	R	R	W	T	P	I	X	E	N	Y	E	A	G	K	G	A	Y	F	A	T	P	P	V	Q	L	I	N	S	L	D	V	A	L	K	E	I	L	E	E	G	L	H	K	R	W	D	L	H	R	E	X	S	D	W	F	K	D	S
Template Known Secondary structure								T									S		S	T	T														T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	.	R	G	F	E	M	D	F	A	E
Query Conservation																																																																								.
Alig confidence																											.	.	.	.	.	.																															.	.								.
Template Conservation																											.	.	.	.	.	.																															.	.
Template Sequence		L	V	N	G	L	Q	L	T	S	V	S	R	Y	P	S	N	X	S	A	H	G	L	T	A	V	.	.	.	.	.	.	Y	V	A	D	P	P	D	V	I	A	F	L	K	S	H	G	V	V	I	A	G	G	I	H	K	D	I	G	P	K	.	.	Y	I	R	I	G	H	X	G	V	T	A	C	N	K	N	L	P
Template Known Secondary structure				T	T	T					S	S		S	S	S	T	T	B		S	S					.	.	.	.	.	.			S												T	T				B					T	T	T	G	G	G	.	.								G	G	G	T	S	S	T	T		T
Template Predicted Secondary structure																											.	.	.	.	.	.																															.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.							.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	X	K	N	C	F	D	L	I	K	L	A	L	Q	R
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions