Job Description P69910 Confidence 99.77% Date Thu Jan 5 12:12:18 GMT 2012 Rank 161 Aligned Residues 332 % Identity 12% Template d1z7da1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.10

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		53	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		D	G	N	A	R	Q	N	L	A	T	.	.	.	.	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																													.	.																					.	.	.	.	.	.	.
Template Conservation																																												.	.																					.	.	.	.	.	.	.
Template Sequence		N	D	K	R	Y	Y	D	F	L	S	A	Y	S	S	V	N	Q	G	H	C	H	P	N	I	L	N	A	M	I	N	Q	A	K	N	L	T	I	C	S	R	A	F	.	.	F	S	V	P	L	G	I	C	E	R	Y	L	T	N	L	L	G	Y	D	K	.	.	.	.	.	.	.	V	L	M	M	N	T	G	A	E
Template Known Secondary structure		T							S	S					T	T	T	T		B	T													T	T		S				T	T	S	.	.																	T		S		.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																												.	.																					.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.								.	.	.	.	.	110	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		A	N	E	T	A	Y	K	L	C	R	K	W	G	Y	E	V	K	K	I	P	E	N	M	A	K	I	V	V	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	N	Q	F	S	K	V	P	Y	D	.	.	.	.	.	.	D	L	E	A	L	E	E	E	L	K	D	P	N	V	C	A	F	I	V
Template Known Secondary structure																	T	S				T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T	.	.	.	.	.	.										T	S	T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		209	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.													.	.	.	.	.	.															.	.																											.
Template Conservation																														.	.	.	.	.	.															.	.																											.
Template Sequence		E	P	I	Q	G	E	A	G	V	I	V	P	S	D	N	Y	L	Q	G	V	Y	D	I	C	K	K	Y	N	.	.	.	.	.	.	V	L	F	V	A	D	E	V	Q	T	G	L	G	R	.	.	T	G	K	L	L	C	V	H	H	Y	N	V	K	P	D	V	I	L	L	G	K	A	L	S	G	G	.	H	Y	P
Template Known Secondary structure			S	S	B	S	T	T	T	S	B				T	T												T	T	.	.	.	.	.	.								T	T	T	T	T	T	T	.	.	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	G	T	T	.	S	S
Template Predicted Secondary structure																														.	.	.	.	.	.															.	.																											.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	.	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P
Query Conservation																																																																	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	A	V	L	A	N	D	D	I	M	L	.	.	.	.	.	.	.	.	.	.	.	V	I	K	P	G	E	H	G	S	T	Y	G	G	N	P	L	A	A	S	I	C	V	E	A	L	N	V	L	I	N	E	K	L	C	E	N	A	E	K	L	G	G	P	F	L	E	N	L	K	R	E	L	K	D	S	K	I
Template Known Secondary structure													T	.	.	.	.	.	.	.	.	.	.	.	T			T	T					T	T	T	T																		T	T																					T	T		T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.												.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K
Query Conservation
Alig confidence							.	.	.	.	.													.	.	.																							.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.													.	.	.																							.	.	.	.	.	.	.
Template Sequence		V	R	D	V	R	.	.	.	.	.	G	K	G	L	L	C	A	I	E	F	K	N	.	.	.	E	L	V	N	V	L	D	I	C	L	K	L	K	E	N	G	L	I	T	R	D	V	.	.	.	.	.	.	.	H	D	K	T	I	R	L	T	P	P	L	C	I	T	K	E	Q	L	D	E	C	T	E	I	I	V
Template Known Secondary structure							.	.	.	.	.			T	T								T	.	.	.	T	T													T	T							.	.	.	.	.	.	.	T	T	T								T	T
Template Predicted Secondary structure							.	.	.	.	.													.	.	.																							.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.						.	.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.								.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		443	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	K	Y	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	V	K	F	F	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions