Job Description P69910 Confidence 99.85% Date Thu Jan 5 12:12:18 GMT 2012 Rank 111 Aligned Residues 332 % Identity 12% Template d1y4ia1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.90

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	R	Q	N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G
Query Conservation
Alig confidence																																															.	.	.	.										.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.										.	.	.	.	.	.	.
Template Sequence		S	T	P	I	F	Q	T	S	T	F	V	F	D	S	A	E	Q	G	A	A	R	F	A	L	E	E	S	G	Y	I	Y	T	R	L	G	N	P	T	T	D	A	L	E	K	K	.	.	.	.	L	A	V	L	E	R	G	E	A	.	.	.	.	.	.	.	G	L	A	T	A	S	G	I	S	A	I	T	T	T	L
Template Known Secondary structure		S							S					S	S										S		S	S	S	S				T	T	S											.	.	.	.						T		S		.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																															.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	.	.	.	.	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G
Query Conservation																																					.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.															.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		L	T	L	.	.	.	.	.	.	.	.	.	.	.	.	C	Q	Q	G	D	H	I	V	S	A	S	A	I	Y	G	C	T	H	A	F	L	S	H	S	M	P	K	F	G	I	N	V	R	F	V	D	A	G	.	.	.	.	.	.	K	P	E	E	I	R	A	A	M	R	P	E	T	K	V	V	Y	I	E	T	P
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.			T	T							S	S	S										T					T	T								T	T	.	.	.	.	.	.	S										T	T								S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
		97	.	.													100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R
Query Conservation
Alig confidence																							.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		A	N	P	T	L	S	L	V	D	I	E	T	V	A	G	I	A	H	Q	Q	G	.	.	.	.	.	.	A	L	L	V	V	D	N	T	F	M	S	P	Y	C	Q	Q	P	.	.	.	.	.	.	.	.	L	Q	L	G	A	D	I	V	V	H	S	V	T	Y	I	N	G	H	G	D	V	I	G	G	I	I	V	G
Template Known Secondary structure			T	T	T																T	T	.	.	.	.	.	.								T	T	T		T	T	T			G	.	.	.	.	.	.	.	.	G	G	G	T		S										S		S	S
Template Predicted Secondary structure																							.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		K	Q	E	F	I	D	Q	A	R	F	V	G	L	K	D	I	T	G	G	C	M	.	.	.	.	.	.	.	.	.	.	.	S	P	F	N	A	W	L	T	L	R	G	V	.	.	K	T	L	G	I	R	M	E	R	H	C	E	N	A	L	K	I	A	R	F	L	E	G	H	P	S	I	T	R	V	Y	Y	P	G
Template Known Secondary structure												T					T	T					.	.	.	.	.	.	.	.	.	.	.													.	.	T	T																					T		T	T							T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.												.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
															371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.																					.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	F	T	L	G	G	E	A	T	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.
Template Sequence		L	S	S	H	P	Q	Y	E	L	G	Q	R	Q	M	S	L	P	G	G	I	I	S	F	E	I	A	G	.	.	.	G	L	E	A	G	R	R	M	I	N	S	V	E	L	C	L	L	A	V	S	L	G	D	T	E	T	L	I	Q	H	P	A	S	M	T	H	S	P	V	A	P	E	E	R	L	K	A	G	I	T
Template Known Secondary structure		S	T	T		T	T									S	S			S							T	T	.	.	.											T		S	S	S				S			S		S	S						T	T	T	T	T	T	S	S	S								T	T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	L	I	R	L	S	V	G	L	E	D	P	E	D	I	I	N	D	L	E	H	A	I	R	K	A	T
Template Known Secondary structure		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions