Job Description P69910 Confidence 99.79% Date Thu Jan 5 12:12:18 GMT 2012 Rank 148 Aligned Residues 337 % Identity 12% Template d1vefa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.35

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		53	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		D	G	N	A	R	Q	N	L	A	T	.	.	.	.	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																														.	.																						.	.	.	.	.
Template Conservation																																													.	.																						.	.	.	.	.
Template Sequence		E	G	N	E	Y	I	D	C	V	G	G	Y	G	V	A	N	L	G	H	G	N	P	E	V	V	E	A	V	K	R	Q	A	E	T	L	M	A	M	P	Q	T	L	P	.	.	T	P	M	R	G	E	F	Y	R	T	L	T	A	I	L	P	P	E	L	N	R	.	.	.	.	.	V	F	P	V	N	S	G	T	E
Template Known Secondary structure		T	S						S	S					T		T	T		B	T																				T	T	S		.	.														T	S		T	T				.	.	.	.	.					S	S
Template Predicted Secondary structure																																													.	.																						.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.
Query Sequence		A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	.	.	.	.	.	.	.	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N
Query Conservation																																																	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.													.
Template Conservation														.	.	.	.	.	.	.	.	.																																														.
Template Sequence		A	N	E	A	A	L	K	F	A	R	A	H	.	.	.	.	.	.	.	.	.	T	G	R	K	K	F	V	A	A	M	R	G	F	S	G	R	T	M	G	S	L	S	V	T	W	E	P	K	Y	R	E	P	F	L	P	L	V	E	P	V	E	F	I	P	Y	.	N	D	V	E	A	L	K	R	A	V	D	E	E
Template Known Secondary structure														.	.	.	.	.	.	.	.	.		S								T	T					S	S						T								G	G	G		S		S	S							T	.	T											T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																														.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.										.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.													.	.	.	.	.	.												.	.	.	.
Template Conservation																																				.	.	.	.	.	.												.	.	.	.
Template Sequence		T	A	A	V	I	L	E	P	V	Q	G	E	G	G	V	R	P	A	T	P	E	F	L	R	A	A	R	E	I	T	Q	E	K	G	.	.	.	.	.	.	A	L	L	I	L	D	E	I	Q	T	G	.	.	.	.	M	G	R	T	G	K	R	F	A	F	E	H	F	G	I	V	P	D	I	L	T	L	A	K	A
Template Known Secondary structure									S			T	T	T	T	S																			T	.	.	.	.	.	.								T	T	T	T	.	.	.	.	T	T	T	T	S	S	S	S	T					T				S						G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.												.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	G	G	V	P	L	G	V	A	V	M	R	E	E	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	M	P	K	G	G	H	G	T	T	F	G	G	N	P	L	A	M	A	A	G	V	A	A	I	R	Y	L	E	R	T	R	L	W	E	R	A	A	E	L	G	P	W	F	M	E	K	L
Template Known Secondary structure		G	G	T	T	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	S		T	T	S	S			S	S	T	T																			T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.															.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L
Query Conservation
Alig confidence						.																			.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation						.																			.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		R	A	I	P	.	S	P	K	I	R	E	V	R	G	M	G	L	M	V	G	L	E	L	.	.	.	.	.	.	.	K	E	K	A	A	P	Y	I	A	R	L	E	K	E	H	R	V	L	A	L	.	.	.	.	.	.	.	Q	A	G	P	T	V	I	R	F	L	P	P	L	V	I	E	K	E	D	L	E	R	V
Template Known Secondary structure			T	S		.		T	T								T	T							.	.	.	.	.	.	.	S	S		S																	.	.	.	.	.	.	.		S	S	T	T								T	T
Template Predicted Secondary structure						.																			.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.								.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.								.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		438	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	D	Y	K	A	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	A	V	R	A	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions