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Job DescriptionP69910
Confidence99.94%DateThu Jan 5 12:12:18 GMT 2012
Rank69Aligned Residues375
% Identity13%Templated1rv3a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYP. . . . . . . . . QSAAIDLRCVNMVADLWH
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Template Sequence  DAEVYDIIKKESNRQ. RVGLEL. IASENFASRAVLEALGSCLNNKYS. . LGYPGQRYYGGTEHIDELETLCQKRALQAYG
Template Known Secondary structure 
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TSGGGT


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   110.........120.........130.........140.........150.........160.........170.... .....
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Query Sequence  APAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWD. . . . . . . . . . VELRE
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Template Sequence  LDPQC. . WGVNVQPYSGSPANFAVYTAL. . . . . . . . . . . . VEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMA
Template Known Secondary structure 

TTT..


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GGGT

GGG

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   106...110 .........120.........130. ........140.........150.........160.........170.
 
   180.........190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  IPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV
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Template Sequence  YKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCY. SRNLDYGRLRKIADENG. . . . . . AYLMADMAHISGLVVAGVVPSP
Template Known Secondary structure 
B
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   172.......180.........190.........200..... ....210.........220.. .......230.........240....
 
   260.........270.........280.........290. ........300.........310.........320.........330
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Query Sequence  WDFRLPRVKSISASGHKFGLAPLGCGWVIWRD. . . . . . . . . EEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYE
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Template Sequence  F. . . . EHCHVVTTTTHKTLRGCRAGMIFYRRGVRSEILYNLESLINSAVFP. . . . . . . . . . . . GLQGGPHNHAIAGVAVA
Template Known Secondary structure  G....GT
SSSGGG


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   245 ....250.........260.........270.........280.........290. ........300........
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  FLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFT
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Template Sequence  LKQAMTPEFKEYQRQVVANCRALSAALVELG. YKIVTGGSDN. . . HLILVDLRS. . . KGTDGGRAEKVLEACSIACNKNT
Template Known Secondary structure  TSTT.
GGGS
SS...SGGG...GT

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   316...320.........330.........340...... ...350...... ...360..... ....370.........380........
 
   411...... ..420.... .....430.........440.........450.........460.
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Query Sequence  LGGEATD. . IVVMRIM. . . . CRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQN
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Template Sequence  CPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGPRATL
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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