Job Description P69910 Confidence 99.97% Date Thu Jan 5 12:12:18 GMT 2012 Rank 22 Aligned Residues 347 % Identity 12% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K
Query Conservation
Alig confidence																																																										.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		N	S	L	G	A	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	R	S	W	N	S	A	G	W	R	D	L	S	E	R	L	G	N	R	L	A	T	L	I	G	A	R	D	G	E	.	.	.	.	.	V	V	V	T	D	T	T	S	I	N	L	F	K	V	L	S	A	A	L
Template Known Secondary structure		T	T	S				B	T	T											T						G	G	G					T	S	G	G	G											T	T	T	T			T	T	S	.	.	.	.	.					S
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	.	.	.	.	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T
Query Conservation																													.	.	.	.
Alig confidence														.	.	.	.	.											.	.	.	.																			.	.	.	.	.	.
Template Conservation														.	.	.	.	.																																	.	.	.	.	.	.
Template Sequence		R	V	Q	A	T	R	S	P	E	R	R	V	.	.	.	.	.	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	D	M	L	Q	Q	G	Y	T	L	R	L	V	D	.	.	.	.	.	.	S	P	E	E	L	P	Q	A	I	D	Q	D	T	A	V	V	M	L	T	H	V	N	Y	K	T
Template Known Secondary structure								S	T	T				.	.	.	.	.					T	T	S																	S	S							S	.	.	.	.	.	.	S	G	G	G						S	T	T								S	B		T	T	T
Template Predicted Secondary structure														.	.	.	.	.																																	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	.	A	P	L	G	C	G	W	V	I	W	R	D	E	E
Query Conservation																																																																			.
Alig confidence																			.	.	.	.	.	.																.	.	.	.	.	.	.																					.
Template Conservation																			.	.	.	.	.	.																.	.	.	.	.	.	.
Template Sequence		G	Y	M	H	D	M	Q	A	L	T	A	L	S	H	E	C	G	.	.	.	.	.	.	A	L	A	I	W	D	L	A	H	S	A	G	A	V	P	.	.	.	.	.	.	.	V	D	L	H	Q	A	G	A	D	Y	A	I	G	C	T	Y	K	Y	L	N	G	G	P	G	S	Q	A	F	V	W	V	S	P	Q	L
Template Known Secondary structure			B	B														T	.	.	.	.	.	.								T	T	T	T	T	T	S		.	.	.	.	.	.	.							T		S						S	S	S	T	T				T	T									T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
														294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																																				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																																				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																																				.
Template Conservation
Template Sequence		C	D	L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	Q	T	D	M	A	S	L	R	R	K	S	L	A	L	T	D	L	F	I	E	L	V	E	Q	R	C
Template Known Secondary structure		T	T	T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
				361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																																				.
Query SS confidence		.	.																																																																				.
Query Sequence		.	.	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	.	G	F	E	M	D	F	A	E	L	L
Query Conservation		.	.																																																																				.
Alig confidence		.	.																					.	.	.	.	.	.	.																					.	.	.	.	.	.	.														.
Template Conservation																								.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		A	A	H	E	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	V	S	F	.	.	.	.	.	.	.	E	H	P	E	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	.	.	.	.	.	.	.	Y	R	E	P	R	I	M	R	F	G	F	T	P	L	Y	T	T	F	T	E	V	W	D	A
Template Known Secondary structure		T	T	S						S		S	S	G	G	G	B		S					.	.	.	.	.	.	.			T	T										T	T	T					.	.	.	.	.	.	.			T	T	T								T	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.								.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.								.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		438	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	D	Y	K	A	S	L	K	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	I	L	G	E	I	L	D	R	K
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions