Job Description P69910 Confidence 99.96% Date Thu Jan 5 12:12:18 GMT 2012 Rank 41 Aligned Residues 352 % Identity 11% Template d1h0ca_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.5

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Q	N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M
Query Conservation
Alig confidence																															.	.	.	.	.																							.	.	.	.
Template Conservation																															.	.	.	.	.																							.	.	.	.
Template Sequence		P	N	Q	L	L	L	G	P	G	P	S	N	L	P	P	R	I	M	A	A	G	G	L	Q	M	I	G	S	M	.	.	.	.	.	S	K	D	M	Y	Q	I	M	D	E	I	K	E	G	I	Q	Y	V	F	Q	T	R	.	.	.	.	N	P	L	T	L	V	I	S	G	S	G	H	C	A	L	E	A	A	L	V
Template Known Secondary structure								S	S	S													T						T	T	.	.	.	.	.	S																			T			.	.	.	.		S						S	S
Template Predicted Secondary structure																															.	.	.	.	.																							.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	.	N	T	I	G	V	V	P	T	F	G	V	T	Y	T
Query Conservation																																																																			.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																																					.															.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		N	V	.	.	.	.	.	.	.	.	.	.	.	.	L	E	P	G	D	S	F	L	V	G	A	N	G	I	W	G	Q	R	A	V	D	I	G	E	R	I	G	V	H	P	M	T	K	D	P	G	.	G	H	Y	T	L	Q	E	V	E	E	G	L	A	Q	H	K	P	V	L	L	F	L	T	H	G	E	S	S	T
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.			S	S							B	S	S																B			B			T	T	.																		S						S			T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		92	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A
Query Conservation
Alig confidence																			.	.	.	.	.	.																.	.	.	.	.	.	.																																.
Template Conservation																			.	.	.	.	.	.																.	.	.	.	.	.	.																																.
Template Sequence		G	V	L	Q	P	L	D	G	F	G	E	L	C	H	R	Y	K	.	.	.	.	.	.	C	L	L	L	V	D	S	V	A	S	L	G	G	T	P	.	.	.	.	.	.	.	L	Y	M	D	R	Q	G	I	D	I	L	Y	S	G	S	Q	K	A	L	N	A	P	P	G	T	S	L	I	S	F	S	.	D	K	A
Template Known Secondary structure		T						T	T							T	T	T	.	.	.	.	.	.								T	T	T	T	T	T	S		.	.	.	.	.	.	.			T	T	T	T	T		S						S	S	S	T	T				T	T								.
Template Predicted Secondary structure																			.	.	.	.	.	.																.	.	.	.	.	.	.																																.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.														.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	K	M	Y	S	R	K	T	K	P	F	S	F	Y	L	D	I	K	W	L	A	N	F	W	G	C	D	D	Q	P	R	M	Y	H	H	T	I	P	V	I	S	L	Y	S	L	R	E	S	L	A	L	I	A	E	Q	G	L	E	N	S	W	R	Q	H	R	E	A	A	A	Y	L	H	G	R	L	Q	A	L	G
Template Known Secondary structure						T	T		S	S			S		S	T	T									T	T		S	S	S						S																																												T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.																							.
Query SS confidence																																											.																							.
Query Sequence		P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	.	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	.	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E
Query Conservation																																											.																							.
Alig confidence		.																						.	.	.	.																.															.	.	.						.
Template Conservation		.																						.	.	.	.																															.	.	.
Template Sequence		.	L	Q	L	F	V	K	D	P	A	L	R	L	P	T	V	T	T	V	A	V	P	.	.	.	.	A	G	Y	D	W	R	D	I	V	S	Y	V	I	D	H	F	D	I	E	I	M	G	G	L	G	P	S	T	G	K	.	.	.	V	L	R	I	G	L	L	G	C	N	A	T	R	E	N	V	D	R	V	T	E
Template Known Secondary structure		.			B	S	S		S	G	G	G	B		T	T								.	.	.	.	T	T																							G	G	G	T	T	T	.	.	.								G	G	G		S
Template Predicted Secondary structure		.																						.	.	.	.																															.	.	.
Template SS confidence
			307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.					.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.				.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	K	A	S	L	K	Y	L	S	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	R	A	A	L	Q	H	C	P	K	K
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions