Job Description P69910 Confidence 99.89% Date Thu Jan 5 12:12:18 GMT 2012 Rank 90 Aligned Residues 352 % Identity 13% Template d1c7ga_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D
Query Conservation
Alig confidence																													.	.	.	.									.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.									.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	Q	W	A	G	M	M	I	G	D	E	A	Y	A	G	S	E	N	F	Y	H	L	E	K	T	V	.	.	.	.	K	E	L	F	G	F	K	H	.	.	.	.	.	.	.	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L	A	I	K	P	G	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	S					S	S	S												.	.	.	.							S		.	.	.	.	.	.	.					S	S															T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.									.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.										.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																			.	.	.	.																.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.																			.	.	.	.																.	.	.	.
Query Sequence		K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	.	.	.	.	.	.	.	.	.	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	.	.	.	.	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	.	.	.	.	N
Query Conservation																															.	.	.	.	.	.	.	.	.																			.	.	.	.																.	.	.	.
Alig confidence		.	.																												.	.	.	.	.	.	.	.	.																			.	.	.	.																.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	Y	V	A	G	N	M	Y	F	T	T	T	R	F	H	Q	E	K	N	G	A	T	F	V	D	I	V	R	D	E	A	H	D	A	S	L	N	L	P	F	K	G	D	I	D	L	N	K	L	A	T	L	I	K	E	K	G	A	E	N	I	A	Y	I	C	L	A	V	T	V	N	L	A	G	G	Q	P	V	S
Template Known Secondary structure		.	.					S	S												T	T							B		G	G	G	G		T	T				S		T	T		B														G	G	G								S	S	B	T	T	T	T	S	B
Template Predicted Secondary structure		.	.
Template SS confidence
				116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.											.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	.	.	.	.	.	.	.	.	.	.	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																	.	.	.	.	.	.																																																									.
Template Sequence		M	A	N	M	R	A	V	H	E	M	A	S	T	Y	G	.	.	.	.	.	.	I	K	I	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	A	G	Y	E	N	V	S	I	K	D	I	V	H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V	N	I	G	.	G	F
Template Known Secondary structure																T	.	.	.	.	.	.								T	T												S	T	T		T	T	S											T	T		S						T	T	T	T	T			S	S		.
Template Predicted Secondary structure																	.	.	.	.	.	.																																																									.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.																																										.
Template Conservation																											.	.	.	.	.	.	.	.																																										.
Template Sequence		L	C	M	N	D	E	E	M	F	S	A	A	K	E	L	V	V	V	Y	E	G	M	P	S	Y	.	.	.	.	.	.	.	.	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	R	E	A	.	G	V	P	I	V
Template Known Secondary structure					S																T			T	T	T	.	.	.	.	.	.	.	.	T	T																	T																						T	.	T			B
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.																																										.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.									.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.												.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	.	.	.	.	.	.	.	.	.	.	.	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	.	R	R	G	F	E	M	D	F	A
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		E	P	T	G	G	H	A	V	F	L	D	A	R	R	F	C	P	H	L	T	Q	D	Q	F	P	A	Q	S	L	A	A	S	I	Y	M	E	T	G	V	R	S	M	E	R	G	I	V	S	A	G	R	S	K	E	T	G	E	N	H	R	P	K	L	E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M
Template Known Secondary structure		S	S			S	S											T	T	S		G	G	G															S							S						B		S	S	S			B				S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D	H	P	K	L	Q	G	I	A	Q	Q	N	S	F	K	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	V	A	D	G	I	I	K	L	Y	Q	H	K	E	D	I	R	G	L	T	F	V	Y	E	P	K	Q	L	R	F
Template Known Secondary structure													T	T	G	G	G											S	S	S
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions