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Job DescriptionP69910
Confidence99.89%DateThu Jan 5 12:12:18 GMT 2012
Rank89Aligned Residues362
% Identity14%Templated1ax4a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110.........120.........130.........140...
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Query Sequence  CQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRK
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Template Sequence  GTNAMSDHQWAAMI. . . . TGDEAYAGSRNYYDLK. . . . DKAKELFNYDY. . . . . . . IIPAHQGRGAENILFPVLLKYKQK
Template Known Secondary structure  S




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   53......60...... ...70.........80.. .......90... ......100.........110.......
 
   144.....150.........160.........170.........180..... ....190.........200 .........210
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Query Sequence  RMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPG. . . . . . . . . QLFMDPKRMIEACDE. . . . NTIGVVPTFG
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Template Sequence  E. . . . . GKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVT
Template Known Secondary structure  T.....T

SS
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TT

B
GGGG
TTS

TTTT
B

GGGSS
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   118 .120.........130.........140.........150.........160.........170.........180.........190..
 
   211.... ....220.........230.........240.........250.........260...... ...270......
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Query Sequence  VTYTG. . . . NYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPR. . . . . . . . . . VKSISASGHK
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Template Sequence  CNSAGGQPVSMSNLKEVYEIAKQHG. . . . . . IFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSA. K
Template Known Secondary structure  BTTTTSB


T......


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GGGTT

GGG
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   193......200.........210....... ..220.........230.........240.........250.........260.... .
 
   277..280.........290.........300.........310.........320.........330.........340.........350......
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Query Sequence  FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADE
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Template Sequence  DPLLNIG. GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLA. . . . GRDMAAMVQGLEEGTEEEY. . . LHYRIGQVKYLGDR
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   267..270... ......280.........290.........300..... ....310.........320.... .....330........
 
   357..360.........370.........380.... .....390.........400.........410........ .420.
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Query Sequence  IAKLGPYEFICTGRPDEGIPAVCFKLKD. . . . . GEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDI. . . . . . . . . . VVM
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Template Sequence  LREA. GIPIQY. . . . PTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFM
Template Known Secondary structure  T.T

B
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SSSTTT
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   339340.. ...... .350.........360.........370.........380.........390.........400.........410...
 
   422... ....430.........440.........450.........460.....
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Query Sequence  RIMC. RRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKH
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Template Sequence  RLTIARRVYTNDHMDYIADALIGLKEKFATLKGLEFEYEPPVLRH
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   414.....420.........430.........440.........450........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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