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Job DescriptionP69910
Confidence99.69%DateThu Jan 5 12:12:18 GMT 2012
Rank192Aligned Residues349
% Identity11%Templatec3rq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of aminotransferase class i and ii from veillonella2 parvula
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  QTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKR
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Template Sequence  NLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIR. . . . SIATAGGTGGIHHLIHNY. . . . . . .
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B


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   51........60.........70.........80.........90.........100. ........110.........
 
   145....150.........160.........170.........180.........190.........200 .........210.......
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Query Sequence  MEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDE. . . . . . NTIGVVPTFGVTYTGNY.
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Template Sequence  . . . . . TEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSI
Template Known Secondary structure  .....S
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TTT

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   120.........130.........140.........150.........160.........170.........180.........190....
 
   218.220.........230.........240.........250 .........260.........270...... ...280...... ...
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Query Sequence  . . EFPQPLHDALDKFQADTGIDIDMHIDAASGGFL. . . . APFVAPDIVWDFRLPRVKSISASGHK. FGLAPLGCGW. VIW
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Template Sequence  EDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTXYGQRVGAXIGI
Template Known Secondary structure 
TSS

TTGGGSS
GGGGGGTT

TTSTTTTT

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   195....200.........210.........220.........230.........240.........250.........260.........270....
 
   290.........300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  RDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTG
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Template Sequence  SDDEEIADEFFEVNKSTSRATWSNICRPAXRTXANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG. LPXLPYR
Template Known Secondary structure  SSTSS

T
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   275....280.........290.........300.........310.........320.........330.........340...... ...350...
 
   370.........380.........390.........400.........410.........420.........430.........440.........
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Query Sequence  RPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLS
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Template Sequence  GGF. . . . FITIPTD. . . . . . . SANAICEELKKEHIYV. . . . . . . . IALANGIRIAAC. GIPKCQXTGLAEKIYNAXKSLG
Template Known Secondary structure  SSS....
T.......TTT
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SSGG.GS
TTTT
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   354.. ...360... ......370......... 380.........390. ........400.........410...
 
   450
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Query Sequence  D
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Template Conservation   
Template Sequence  K
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   414
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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