Job Description P69910 Confidence 99.68% Date Thu Jan 5 12:12:18 GMT 2012 Rank 194 Aligned Residues 338 % Identity 10% Template c3qguB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ll-diaminopimelate aminotransferase; PDBTitle: l,l-diaminopimelate aminotransferase from chalmydomonas reinhardtii Resolution 1.55 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A
Query Conservation
Alig confidence																																																.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	M	A	K	A	A	A	G	L	A	T	R	E	G	Y	S	G	Y	G	A	E	Q	G	Q	G	A	L	R	E	A	V	A	S	T	F	Y	G	H	A	G	R	A	A	D	E	.	.	.	.	.	I	F	I	S	D	G	S	K	C	D	I	A	R	I	Q	M	M	F	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											G	G	G	S						S	S		T	T															T	T	T	T			G	G	G	.	.	.	.	.					S														.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.
Predicted Secondary structure																																																	.	.	.	.	.	.																							.	.	.
Query SS confidence																																																	.	.	.	.	.	.																							.	.	.
Query Sequence		G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	.	.	.	.	.	.	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	.	.	.	E	F
Query Conservation																																																	.	.	.	.	.	.																							.	.	.
Alig confidence		.	.																																														.	.	.	.	.	.																							.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	S	K	P	T	V	A	V	Q	D	P	S	Y	P	V	Y	V	D	T	S	V	M	M	G	M	T	G	D	H	N	G	T	G	F	D	G	I	E	Y	M	V	C	N	P	D	N	H	F	F	P	D	L	S	K	A	K	R	T	D	I	I	F	F	C	S	P	N	N	P	T	G	A	A	A	T	R	A	Q
Template Known Secondary structure		.	.		S	S	S							S			T									T	T		S			B		S	S	S	B	T	T								G	G	G	T	T				T	T	S					S						S	S		T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	.	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E
Query Conservation																																												.
Alig confidence														.	.	.	.	.	.																									.
Template Conservation														.	.	.	.	.	.
Template Sequence		L	T	E	L	V	N	F	A	R	K	N	G	.	.	.	.	.	.	S	I	L	V	Y	D	A	A	Y	A	L	Y	I	S	N	P	D	C	P	K	T	I	Y	E	I	P	G	A	D	E	V	A	I	E	T	C	S	F	S	K	Y	A	G	F	T	G	V	R	L	G	W	T	V	V	P	K	A	L	K	Y	A	N
Template Known Secondary structure													T	.	.	.	.	.	.								T	T	G	G	G				T	T	S		S	S	G	G	G	S	T	T	G	G	G	T								S	G	G	G	T		T	T										T	T		B		T	T
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V
Query Conservation
Alig confidence															.	.																																																.												.	.	.	.
Template Conservation															.	.																																																.												.	.	.	.
Template Sequence		G	E	P	V	H	A	D	W	N	R	V	M	T	.	.	T	C	F	N	G	A	S	N	I	V	Q	A	G	G	L	A	C	L	Q	P	E	G	L	K	E	M	N	A	M	I	K	F	Y	K	E	N	A	Q	I	L	K	T	T	F	T	E	M	.	G	F	S	V	Y	G	G	D	D	A	P	.	.	.	.	Y	I
Template Known Secondary structure		S		B											.	.		S																T	S																												T	.	T						S	S	S	S	S	.	.	.	.
Template Predicted Secondary structure															.	.																																																.												.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.					.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	.	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L
Query Conservation																														.
Alig confidence							.	.	.	.																				.													.	.							.	.
Template Conservation							.	.	.	.																																	.	.							.	.
Template Sequence		W	V	G	F	P	.	.	.	.	G	K	P	S	W	D	V	F	A	E	I	L	E	R	C	N	I	V	T	T	P	G	S	G	Y	G	P	A	G	E	G	F	.	.	V	R	A	S	A	F	.	.	G	S	R	E	N	I	L	E	A	V	R	R	F	K	E	A	Y
Template Known Secondary structure						T	.	.	.	.	T	S																				G	G	G	G		G	G	G	T	T		.	.							.	.	S
Template Predicted Secondary structure							.	.	.	.																																	.	.							.	.
Template SS confidence
		378	.	380	.	.					.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.	.	420			.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions