Phyre 2 alignment of P69910 with c3pplB

Job Description P69910
Confidence 99.61% Date Thu Jan 5 12:12:18 GMT 2012

Rank 205 Aligned Residues 317

% Identity 13% Template c3pplB_

PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate transaminase (ncgl0237, cgl0240)2 from corynebacterium glutamicum atcc 13032 kitasato at 1.25 a3 resolution

Resolution 1.25 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	.	.	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E
Query Conservation																																	.	.
Alig confidence																	.	.	.	.	.												.	.
Template Conservation																	.	.	.	.	.
Template Sequence	D	I	R	Q	I	W	A	D	L	L	G	V	P	V	E	Q	.	.	.	.	.	V	L	A	G	D	A	S	S	L	N	I	X	F	D	V	I	S	W	S	Y	I	F	G	N	N	D	S	V	Q	P	W	S	K	E	E	T	V	K	W	I	C	P	V	P	G	Y	D	R	H	F	S	I	T	E	R	F	G	F	E
Template Known Secondary structure											T	S		G	G	G	.	.	.	.	.					S	S																			T	T		S	S		G	G	G	S	S									S												T	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

	177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																				.	.																		.	.	.	.
Query SS confidence																																				.	.																		.	.	.	.
Query Sequence	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	.	.	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	.	.	.	.	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L
Query Conservation																																				.	.																		.	.	.	.
Alig confidence											.	.																								.	.																		.	.	.	.				.	.	.	.	.	.
Template Conservation											.	.																																																		.	.	.	.	.	.
Template Sequence	X	I	S	V	P	X	N	E	D	G	.	.	P	D	X	D	A	V	E	E	L	V	K	N	P	Q	V	K	G	X	W	V	V	P	V	F	S	N	P	T	G	F	T	V	T	E	D	V	A	K	R	L	S	A	X	E	T	A	A	P	D	.	.	.	.	.	.	F	R	V	V	W	D	N	A	Y	A	V	H	T
Template Known Secondary structure								T	T		.	.										T	T	S	T	T									S	S		T	T	T																		S	S	T	T	.	.	.	.	.	.								T	T	T	T		B
Template Predicted Secondary structure											.	.																																																		.	.	.	.	.	.
Template SS confidence
	156	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.

	251	.	.	.	.	.	.	.							.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence	A	P	F	V	A	P	D	I	.	.	.	.	.	.	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																															.	.																	.	.	.	.	.	.	.
Template Conservation																																													.	.																	.	.	.	.	.	.	.
Template Sequence	L	T	D	E	F	P	E	V	I	D	I	V	G	L	G	E	A	A	G	N	P	N	R	F	W	A	F	T	S	T	S	K	I	T	L	A	G	A	G	V	S	F	F	L	.	.	T	S	A	E	N	R	K	W	Y	T	G	H	A	G	I	R	.	.	.	.	.	.	.	G	I	G	P	N	K	V	N	Q	L	A
Template Known Secondary structure	S	S	S															T	T		T	T								S	T	T	T	S		T	T	T	S						.	.																	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																													.	.																	.	.	.	.	.	.	.
Template SS confidence
	228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.								.	.	290	.	.	.	.	.	.	.	.

	325	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence	I	A	Q	Y	Y	.	.	.	.	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																																												.	.	.	.							.	.	.	.	.
Template Conservation																																																					.	.	.	.							.	.	.	.	.
Template Sequence	H	A	R	Y	F	G	D	A	E	G	V	R	A	V	X	R	K	H	A	A	S	L	A	P	K	F	N	K	V	L	E	I	L	D	S	R	L	A	E	Y	G	V	A	Q	W	T	V	P	A	G	G	Y	.	.	.	.	F	I	S	L	D	V	.	.	.	.	.	V	P	G	T	A	S	R	V	A	E	L	A	K
Template Known Secondary structure							S																															G	G	G	T								S	B	S	S	.	.	.	.							.	.	.	.	.	S	T	T
Template Predicted Secondary structure																																																					.	.	.	.							.	.	.	.	.
Template SS confidence
	299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350					.	.	.	.	.	.						.	.	.	360	.	.	.	.	.	.	.	.	.

	401	.	.	.	.	.				.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence	L	R	G	W	Q	V	.	.	.	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y
Query Conservation							.	.	.
Alig confidence							.	.	.																							.
Template Conservation																																.
Template Sequence	E	A	G	I	A	L	T	G	A	G	S	S	Y	P	L	R	Q	D	P	E	N	K	N	L	R	L	A	P	S	L	P	.	P	V	E	E	L	E	V	A	X	D	G	V	A	T	C	V	L	L
Template Known Secondary structure		T	T						T	T	T	T	S	G	G	G			T	T	S								S	S	S	.
Template Predicted Secondary structure																																.
Template SS confidence
	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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