Job Description P69910 Confidence 99.79% Date Thu Jan 5 12:12:18 GMT 2012 Rank 150 Aligned Residues 328 % Identity 12% Template c3op7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution Resolution 1.70 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A
Query Conservation
Alig confidence																																						.	.	.									.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.									.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	G	T	N	P	E	D	F	Y	K	K	L	Q	G	T	K	L	N	Y	G	W	I	E	G	S	P	A	F	K	K	S	V	S	Q	L	.	.	.	Y	T	G	V	K	P	E	Q	.	.	.	.	.	I	L	Q	T	N	G	A	T	G	A	N	L	L	V	L	Y	S	L	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T												T	S			S	S			T	T											T	T	.	.	.	S	S	S			G	G	G	.	.	.	.	.					S														.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.									.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.
Predicted Secondary structure																																								.																																			.	.	.
Query SS confidence																																								.																																			.	.	.
Query Sequence		A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	.	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	P	Q	P	L
Query Conservation																																								.																																			.	.	.
Alig confidence		.	.																																					.																																			.	.	.
Template Conservation		.	.
Template Sequence		.	.	I	E	P	G	D	H	V	I	S	L	Y	P	T	Y	Q	Q	L	Y	D	I	P	K	S	L	G	A	E	V	D	L	W	Q	I	E	E	E	N	G	W	L	P	D	L	E	K	L	R	Q	L	I	R	P	T	T	K	X	I	C	I	N	N	A	N	N	P	T	G	A	V	X	D	R	T	Y	L	E	E	L
Template Known Secondary structure		.	.			T	T								S	S		T									T	T										G	G	G	T	T													T	T								S	S		T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V
Query Conservation
Alig confidence										.	.	.	.	.	.												.	.	.	.																																							.
Template Conservation										.	.	.	.	.	.												.	.	.	.																																							.
Template Sequence		V	E	I	A	S	E	V	G	.	.	.	.	.	.	A	Y	I	L	S	D	E	V	Y	R	S	.	.	.	.	F	S	E	L	D	V	P	S	I	I	E	V	Y	D	K	G	I	A	V	N	S	L	S	T	Y	S	L	P	G	I	R	I	G	W	V	A	A	N	.	H	Q	V	T	D	I	L	R	D	Y	R	D
Template Known Secondary structure							T	T	T	.	.	.	.	.	.									S			.	.	.	.		S	S	S										T	T											S		G	G	G									.								T	T	T	G	G
Template Predicted Secondary structure										.	.	.	.	.	.												.	.	.	.																																							.
Template SS confidence
		179	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template Sequence		Y	T	X	I	C	.	.	.	.	.	.	.	.	.	.	.	A	G	V	F	D	D	L	V	A	Q	L	A	L	A	H	Y	Q	E	I	L	E	R	N	R	H	I	L	E	E	N	L	A	I	L	D	Q	W	I	E	E	E	P	L	V	S	Y	I	R	P	A	V	V	S	.	.	.	.	T	S	F	V	K	I	A
Template Known Secondary structure		G	T	T	S		.	.	.	.	.	.	.	.	.	.	.															T																											T	T							S	S	S	S	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template SS confidence
		249	250	.	.	.												.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S
Query Conservation
Alig confidence			.	.	.																											.	.	.											.	.
Template Conservation			.	.	.																											.	.	.											.	.
Template Sequence		V	.	.	.	D	X	P	X	E	D	F	C	L	Q	L	L	Q	E	H	G	V	L	L	V	P	G	N	R	F	E	.	.	.	R	D	G	Y	V	R	L	G	F	A	.	.	C	E	Q	E	T	L	I	K	G	L	E	K	L	S	Q	F	L	R	R	F	D
Template Known Secondary structure			.	.	.	S	S																				G	G	G	G	T	.	.	.		T	T								.	.	S																	G	G	G
Template Predicted Secondary structure			.	.	.																											.	.	.											.	.
Template SS confidence
		314				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions