Job Description P69910 Confidence 99.78% Date Thu Jan 5 12:12:18 GMT 2012 Rank 154 Aligned Residues 364 % Identity 11% Template c3nuiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate transaminase; PDBTitle: crystal structure of omega-transferase from vibrio fluvialis js17 Resolution 2.00 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		D	G	N	A	R	Q	N	L	A	T	F	C	Q	.	.	.	.	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																																																		.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		N	G	R	R	Y	L	D	A	N	S	G	L	W	N	M	V	A	G	F	D	H	K	G	L	I	D	A	A	K	A	Q	Y	E	R	F	P	G	Y	H	A	F	F	G	R	M	S	D	Q	T	V	M	L	S	E	K	L	V	E	V	S	P	F	D	S	G	R	.	.	.	.	.	V	F	Y	T	N	S	G	S	E
Template Known Secondary structure		T							T	T					T		T	T		S																						B	T	T	B																S	S		S	S			.	.	.	.	.					S	S
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.														.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		A	N	D	T	M	V	K	M	L	W	F	L	H	A	A	E	.	.	.	.	G	K	P	Q	K	R	K	I	L	T	R	W	N	A	Y	H	G	V	T	A	V	S	A	S	M	T	G	K	P	Y	N	S	V	F	G	L	P	L	P	G	F	V	H	L	T	C	P	H	Y	W	R	Y	G	E	E	G	E	T	E	E
Template Known Secondary structure																	T	.	.	.	.	T		T	T								T	T					S	S							S			G	G	G	G	G	G	T		S		T	T															T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
							190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.										.	.	.	.																						.	.	.	.
Query SS confidence		.	.	.	.	.										.	.	.	.																						.	.	.	.
Query Sequence		.	.	.	.	.	D	P	K	R	M	I	E	A	C	.	.	.	.	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P
Query Conservation		.	.	.	.	.										.	.	.	.																						.	.	.	.
Alig confidence		.	.	.	.	.										.	.	.	.																						.	.	.	.													.	.	.	.	.	.															.	.
Template Conservation																																																									.	.	.	.	.	.															.	.
Template Sequence		Q	F	V	A	R	L	A	R	E	L	E	E	T	I	Q	R	E	G	A	D	T	I	A	G	F	F	A	E	P	V	M	G	A	G	G	V	I	P	P	A	K	G	Y	F	Q	A	I	L	P	I	L	R	K	Y	D	.	.	.	.	.	.	I	P	V	I	S	D	E	V	I	C	G	F	G	R	.	.	T	G	N
Template Known Secondary structure																				G	G	G								S	S	B	S	T	T	T	S	B				T	T												T	T	.	.	.	.	.	.								T	T	T	T	T	T	T	.	.	T	S	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.															.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R
Query Conservation
Alig confidence																									.																											.	.	.	.	.	.	.
Template Conservation																									.																											.	.	.	.	.	.	.
Template Sequence		T	W	G	C	V	T	Y	D	F	T	P	D	A	I	I	S	S	K	N	L	T	A	G	.	F	F	P	M	G	A	V	I	L	G	P	E	L	S	K	R	L	E	T	A	I	E	A	I	E	E	.	.	.	.	.	.	.	F	P	H	G	F	T	A	S	G	H	P	V	G	C	A	I	A	L	K	A	I	D	V
Template Known Secondary structure		S	S					T	T				S						G	G	G	G	T	T	.	S	S																							T	S	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																									.																											.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.								.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.						.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	.	.	.	.	.	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L
Query Conservation																																																										.	.	.	.	.
Alig confidence																																																										.	.	.	.	.															.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		V	M	N	E	G	L	A	E	N	V	R	R	L	A	P	R	F	E	E	R	L	K	H	I	A	E	R	P	N	I	G	E	Y	R	G	I	G	F	M	W	A	L	E	A	V	K	D	K	A	S	K	T	P	F	D	G	N	L	S	V	S	E	R	I	A	N	T	C	T	D	L	G	L	I	C	.	.	.	.	.
Template Known Secondary structure					S	S																				T	T	S	T	T								T	T								S	B	T	T	T	T	B				G	G	G													T	T				.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	R	P	L	G	Q	S	V	V	L	C	P	P	F	I	L	T	E	A	Q	M	D	E	M	F	D	K	L	E	K	A	L	D	K	V	F
Template Known Secondary structure		.	.	.				T	T								T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.