Job Description P69910 Confidence 99.96% Date Thu Jan 5 12:12:18 GMT 2012 Rank 38 Aligned Residues 340 % Identity 12% Template c3m5uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: crystal structure of phosphoserine aminotransferase from2 campylobacter jejuni Resolution 2.15 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																							.	.	.										.	.	.	.
Query SS confidence																							.	.	.										.	.	.	.
Query Sequence		L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	.	.	.	N	K	N	W	I	D	K	E	E	.	.	.	.	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L
Query Conservation																							.	.	.										.	.	.	.
Alig confidence																							.	.	.										.	.	.	.																							.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		N	F	S	A	G	P	S	T	L	P	L	E	I	L	E	Q	A	Q	K	E	L	C	D	Y	Q	G	R	G	Y	S	I	X	E	I	S	H	R	T	K	V	F	E	E	V	H	F	G	A	Q	E	K	A	K	K	L	Y	E	L	N	.	.	.	.	D	D	Y	E	V	L	F	L	Q	G	G	A	S	L	Q	F	A
Template Known Secondary structure					S	S	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		S	S	S																			T			.	.	.	.	T	T							S	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	.	.	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G
Query Conservation																																			.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																	.	.																				.						.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.																																						.						.
Template Sequence		X	I	P	X	N	.	.	.	.	.	.	.	.	.	.	.	.	L	A	L	N	G	V	C	E	Y	A	N	T	G	V	W	T	K	K	A	I	K	E	A	Q	I	L	G	V	N	V	K	T	V	A	S	S	E	.	E	S	N	F	D	.	H	I	P	R	V	E	F	S	D	N	A	D	Y	A	Y	I	C	S	N
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.				S	S								S													T	T										T	.	T	T	T	S		.	S								T	T	S	S						S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																																						.						.
Template SS confidence
		81	.	.	.	.													.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R
Query Conservation
Alig confidence														.	.	.	.	.	.				.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																		.
Template Conservation														.	.	.	.	.	.				.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																		.
Template Sequence		N	T	I	Y	G	T	Q	Y	Q	N	Y	P	.	.	.	.	.	.	K	T	K	.	.	.	.	.	.	T	P	L	I	V	D	A	S	S	D	F	F	S	R	K	V	.	.	.	.	.	.	.	.	.	D	F	S	N	I	A	L	F	Y	G	G	V	Q	K	N	A	G	.	I	S	G	L	S	C	I	F	I	R
Template Known Secondary structure			T	T	T	T				S	S			.	.	.	.	.	.			S	.	.	.	.	.	.	S							G	G	G	T	T	S	S			.	.	.	.	.	.	.	.	.			T	T								T	T	T	T	S	S	.		T	T
Template Predicted Secondary structure														.	.	.	.	.	.				.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.							.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																													.
Query SS confidence																					.	.																													.
Query Sequence		D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	.	.	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	.	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C
Query Conservation																					.	.																													.
Alig confidence																					.	.																													.
Template Conservation
Template Sequence		K	D	X	L	E	R	S	K	N	K	Q	I	P	S	X	L	N	Y	L	T	H	A	E	N	Q	S	L	F	N	T	P	P	T	F	A	I	Y	X	F	N	L	E	X	D	W	L	L	N	Q	G	G	L	D	K	V	H	E	K	N	S	Q	K	A	T	X	L	Y	E	C	I	D	L	S	N	G	F	Y	K	G	H
Template Known Secondary structure										T					G	G	G								T	T	T		S	S																			T	T	T																						T	S	T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y
Query Conservation
Alig confidence																			.	.	.																													.	.	.	.	.
Template Conservation																			.	.	.																													.	.	.	.	.
Template Sequence		A	D	K	K	D	R	S	L	X	N	V	S	F	N	I	A	K	.	.	.	N	K	D	L	E	P	L	F	V	K	E	A	E	E	A	G	X	I	G	L	K	G	H	R	I	L	G	G	.	.	.	.	.	I	R	A	S	I	Y	N	A	L	N	L	D	Q	V	K	T	L	C	E	F	X	K	E	F	Q	G	K
Template Known Secondary structure		S		G	G	G	B		S	S							S	S	.	.	.		T	T												T	T					B			T	T	T		S	.	.	.	.	.							T	T	S
Template Predicted Secondary structure																			.	.	.																													.	.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.						330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions