Phyre 2 alignment of P69910 with c3ly1C

Job Description P69910
Confidence 99.71% Date Thu Jan 5 12:12:18 GMT 2012

Rank 184 Aligned Residues 318

% Identity 12% Template c3ly1C_

PDB info PDB header:transferase Chain: C: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a3 resolution

Resolution 1.80 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E
Query Conservation
Alig confidence																	.	.	.	.						.	.																						.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.						.	.																						.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence	G	X	S	P	K	A	Q	A	A	A	R	D	A	V	V	K	.	.	.	.	A	N	R	Y	A	.	.	K	N	E	I	L	X	L	G	N	K	L	A	A	H	H	Q	V	E	A	P	S	.	.	.	.	.	I	L	L	T	A	G	S	S	E	G	I	R	A	A	I	E	A	Y	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														G	G	G	.	.	.	.	T	T	S			.	.															T	T	S		G	G	G	.	.	.	.	.					S														.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.						.	.																						.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
	69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

	147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.
Predicted Secondary structure																																																								.	.																	.	.	.
Query SS confidence																																																								.	.																	.	.	.
Query Sequence	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	.	.	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	.	.	.	E	F	P	Q
Query Conservation																																																								.	.																	.	.	.
Alig confidence	.	.	.																																					.																.	.																	.	.	.
Template Conservation	.	.	.																																					.
Template Sequence	.	.	.	A	S	L	E	A	Q	L	V	I	P	E	L	T	Y	G	D	G	E	H	F	A	K	I	A	G	X	K	V	T	K	V	K	X	L	D	N	.	W	A	F	D	I	E	G	L	K	A	A	V	A	A	Y	S	G	P	S	I	V	Y	L	V	N	P	N	N	P	T	G	T	I	T	P	A	D	V	I	E
Template Known Secondary structure	.	.	.			T	T							S	S	S		T									T	T										T	T	.	S													T			S								S	S		T	T	T
Template Predicted Secondary structure	.	.	.																																					.
Template SS confidence
				129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

	222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F
Query Conservation
Alig confidence											.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence	P	W	I	A	S	K	P	A	N	T	.	.	.	.	.	.	X	F	I	V	D	E	A	Y	A	E	F	V	N	D	P	R	F	R	S	I	S	P	X	I	T	Q	G	A	E	N	I	I	L	L	K	T	F	S	K	I	H	A	X	A	G	X	R	V	G	Y	A	V	A	H	P	T	V	I	A	L	X	G	R	Y
Template Known Secondary structure					T			T	T		.	.	.	.	.	.							T	T	G	G	G				T	T				S						T	T		S	S							S	S	S	T	T			G	G	G																	T	T
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
	205	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

	302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.					.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.					.	.	.	.	.
Template Sequence	V	A	G	E	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	S	G	V	D	A	A	L	A	S	X	N	D	S	A	F	I	T	Y	S	K	K	S	N	D	V	S	R	Q	I	L	L	K	A	L	E	D	L	K	.	L	P	Y	L	.	.	.	.	.	P	S	E	G	N	F	V	F	H	Q
Template Known Secondary structure	T	T	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								T	.			B		.	.	.	.	.				S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.					.	.	.	.	.
Template SS confidence
	279	280	.	.	.	.															.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.						.	330	.	.	.	.	.	.	.	.

	382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y
Query Conservation
Alig confidence		.	.	.	.	.	.																												.	.	.	.								.	.	.
Template Conservation		.	.	.	.	.	.																												.	.	.	.								.	.	.
Template Sequence	L	.	.	.	.	.	.	V	V	P	L	K	D	Y	Q	T	H	X	A	D	A	G	V	L	I	G	R	A	F	P	P	A	D	N	.	.	.	.	W	C	R	I	S	L	G	.	.	.	T	P	Q	E	X	Q	W	V	A	D	T	X	R	E	F	R	K	K
Template Known Secondary structure		.	.	.	.	.	.	S	S												T	T								T	T		T	T	.	.	.	.								.	.	.																		T
Template Predicted Secondary structure		.	.	.	.	.	.																												.	.	.	.								.	.	.
Template SS confidence
	339							340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.					.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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