Job Description P69910 Confidence 99.89% Date Thu Jan 5 12:12:18 GMT 2012 Rank 88 Aligned Residues 337 % Identity 9% Template c3lwsF_ PDB info PDB header:lyase Chain: F: PDB Molecule:aromatic amino acid beta-eliminating PDBTitle: crystal structure of putative aromatic amino acid beta-2 eliminating lyase/threonine aldolase. (yp_001813866.1) from3 exiguobacterium sp. 255-15 at 2.00 a resolution Resolution 2.00 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	R	Q	N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G
Query Conservation
Alig confidence																																													.	.	.	.												.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.												.	.	.	.	.	.	.
Template Sequence		Q	T	T	G	Q	I	S	G	H	G	K	R	N	V	G	V	L	K	T	A	F	A	A	V	A	D	E	X	A	S	D	Q	Y	G	T	G	A	I	I	E	P	F	E	.	.	.	.	Q	K	F	A	D	V	L	G	X	D	D	.	.	.	.	.	.	.	A	V	F	F	P	S	G	T	X	A	Q	Q	V	A	L
Template Known Secondary structure		T		S			S	S	B	S	S												T	T	S		T	T						T	T			T	T						.	.	.	.							T	T		S		.	.	.	.	.	.	.					S
Template Predicted Secondary structure																																													.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	.	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y
Query Conservation																																											.
Alig confidence								.	.	.	.	.	.	.	.	.	.																										.																																		.
Template Conservation								.	.	.	.	.	.	.	.	.	.																																																												.
Template Sequence		R	I	W	S	D	E	.	.	.	.	.	.	.	.	.	.	T	D	N	R	T	V	A	Y	H	P	L	C	H	L	E	I	H	E	Q	D	G	L	K	E	L	H	P	I	E	T	I	L	V	G	A	A	D	R	L	X	T	L	D	E	I	K	A	L	P	D	I	A	C	L	L	L	E	L	P	.	Q	R	E	I
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.		T								T	T						S	S	T	T						S	S							S		T	T	S												S		S						S	S	.	B	G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																																																												.
Template SS confidence
		79	80	.	.	.	.											.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.
		214	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		T	G	N	Y	.	.	.	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R
Query Conservation						.	.	.
Alig confidence						.	.	.															.	.	.	.	.	.															.	.																													.	.	.
Template Conservation																							.	.	.	.	.	.															.	.																													.	.	.
Template Sequence		G	G	V	A	P	A	F	S	E	L	E	T	I	S	R	Y	C	R	E	R	G	.	.	.	.	.	.	I	R	L	H	L	D	G	A	R	L	F	E	X	L	.	.	P	Y	Y	E	K	T	A	A	E	I	A	G	L	F	D	S	I	Y	I	S	F	Y	G	L	G	G	I	A	.	.	.	G	A	I	L	A	G
Template Known Secondary structure		T	S	B																		T	.	.	.	.	.	.								T	T						.	.				T								T	T		S												S	S	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.															.	.																													.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Template Sequence		P	A	A	F	C	Q	T	A	R	I	W	K	R	R	Y	G	G	D	L	I	S	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	I	V	S	A	D	Y	Y	Y	E	L	R	K	D	R	X	G	Q	Y	Y	E	Q	A	K	Q	L	A	E	Q	F	N	A	L	P	G	V	H	T	T	P	E	.	.
Template Known Secondary structure																	T				S				.	.	.	.	.	.	.	.	.	.	.	.	.														T	T																			S	T	T					S	S	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240														.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	.	.	.	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S
Query Conservation																																																										.	.	.
Alig confidence		.														.	.																					.	.																			.	.	.
Template Conservation		.														.	.																					.	.
Template Sequence		.	V	P	V	S	N	X	F	H	L	H	F	D	G	.	.	Q	A	A	D	I	S	P	K	L	E	Q	V	Q	E	E	T	G	L	G	F	.	.	V	G	Y	L	V	D	K	D	G	Y	C	S	T	E	I	S	V	G	D	A	Y	G	E	L	D	Q	Q	T	R	D	A	G	F	A	R	L	R	Q	A
Template Known Secondary structure		.	S		S	S	S								S	.	.																				S	.	.		S						S	S								B						T	S
Template Predicted Secondary structure		.														.	.																					.	.
Template SS confidence
			283	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions