Job Description P69910 Confidence 99.50% Date Thu Jan 5 12:12:18 GMT 2012 Rank 226 Aligned Residues 365 % Identity 15% Template c3i5tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase prk07036 from rhodobacter2 sphaeroides kd131 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		53	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																		.	.	.
Query SS confidence															.	.	.	.																		.	.	.
Query Sequence		D	G	N	A	R	Q	N	L	A	T	F	C	Q	.	.	.	.	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	.	.	.	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G
Query Conservation															.	.	.	.																		.	.	.
Alig confidence															.	.	.	.																		.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.
Template Sequence		D	G	R	R	L	I	D	G	P	A	G	M	W	C	A	Q	V	G	Y	G	R	R	E	I	V	D	A	M	A	H	Q	A	M	V	L	P	Y	A	S	P	W	Y	M	A	T	S	P	A	A	R	L	A	E	K	I	A	T	L	T	P	G	D	L	N	R	.	.	.	.	.	.	.	.	.	I	F	F	T	T	G
Template Known Secondary structure		T							T	T					T		T	T		B																					T	T	T															T	T	S	S	T	T				.	.	.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.										.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.													.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.															.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																																						.															.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	.	.	.	.	.	.	.	.	.	.	.	.	E	L	R	E	I	P	M	R	P	G	Q	L	F	.	.	.	.
Query Conservation																																						.															.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence																					.	.	.	.														.															.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		G	S	T	A	V	D	S	A	L	R	F	S	E	F	Y	N	N	V	L	.	.	.	.	G	R	P	Q	K	K	R	I	I	V	R	Y	D	G	Y	H	G	S	T	A	L	T	A	A	C	T	G	R	T	G	N	W	P	N	F	D	I	A	Q	D	R	I	S	F	L	S	S	P	N	P	R	H	A	G	N	R	S
Template Known Secondary structure																				T	.	.	.	.	T		T	T								T	T					S	S						T				G	G	G		T	T	S					T	T									G	G	G		T	T	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
											189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V
Query Conservation		.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																.	.	.	.	.													.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		Q	E	A	F	L	D	D	L	V	Q	E	F	E	D	R	I	E	S	L	G	P	D	T	I	A	A	F	L	A	E	P	I	L	A	S	G	G	V	I	I	P	P	A	G	Y	H	A	R	F	K	A	I	C	E	K	H	D	.	.	.	.	.	.	I	L	Y	I	S	D	E	V	V	T	G	F	G	R	C	G	E
Template Known Secondary structure																						G	G	G								S	S	B	T	T	T	T	S	B				T	T												T	T	.	.	.	.	.	.								T	T	T	T	T	T	T	T	S	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L
Query Conservation
Alig confidence													.														.															.	.	.	.
Template Conservation													.														.															.	.	.	.
Template Sequence		W	F	A	S	E	K	V	F	G	V	V	.	P	D	I	I	T	F	A	K	G	V	T	S	G	.	Y	V	P	L	G	G	L	A	I	S	E	A	V	L	.	.	.	.	A	R	I	S	G	E	N	A	K	G	S	W	F	T	N	G	Y	T	Y	S	N	Q	P	V	A	C	A	A	A	L	A	N	I	E	L	M
Template Known Secondary structure		S						T	T				.		S						G	G	G	G	T	T	.	S	S													.	.	.	.		T	T	S	G	G	G		T	T								T	T	T	T
Template Predicted Secondary structure													.														.															.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E
Query Conservation
Alig confidence												.	.	.																																												.																.	.	.	.	.	.	.	.
Template Conservation												.	.	.																																												.																.	.	.	.	.	.	.	.
Template Sequence		E	R	E	G	I	V	D	Q	A	R	.	.	.	E	M	A	D	Y	F	A	A	A	L	A	S	L	R	D	L	P	G	V	A	E	T	R	S	V	G	L	V	G	C	V	Q	C	L	L	G	T	A	E	D	K	A	F	.	T	L	K	I	D	E	R	C	F	E	L	G	L	I	V	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T							.	.	.												T	T	T	T	S	T	T								T	T																	.											T	T				.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.																																												.																.	.	.	.	.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D	H	P	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	L	G	D	L	C	V	I	S	P	P	L	I	I	S	R	A	Q	I	D	E	M	V	A	I	M	R	Q	A	I	T	E	V	S	A	A	H	G	L
Template Known Secondary structure					T	T								T	T																								S
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.