Phyre 2 alignment of P69910 with c3ffhA

Job Description P69910
Confidence 99.77% Date Thu Jan 5 12:12:18 GMT 2012

Rank 162 Aligned Residues 310

% Identity 17% Template c3ffhA_

PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of histidinol-phosphate aminotransferase from2 listeria innocua clip11262.

Resolution 2.31 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P
Query Conservation
Alig confidence																	.	.	.	.	.	.																		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.																		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	V	A	A	I	Q	A	N	S	S	V	E	T	E	I	Y	A	.	.	.	.	.	.	S	S	L	R	K	E	V	A	D	F	Y	Q	L	E	E	E	E	.	.	.	.	.	L	I	F	T	A	G	V	D	E	L	I	E	L	L	T	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	L	D	T	T	T	N
Template Known Secondary structure							T			S				B			.	.	.	.	.	.												T			G	G	G	.	.	.	.	.					S	S													.	.	.	.	.	.	.	.	.	.	.	.		S	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.																		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.													.	.	100	.	.	.

	156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G
Query Conservation
Alig confidence																															.																																																.	.
Template Conservation																															.																																																.	.
Template Sequence	T	V	X	A	T	P	T	F	V	Q	Y	R	Q	N	A	L	I	E	G	A	E	V	R	E	I	P	L	L	Q	D	.	G	E	H	D	L	E	G	X	L	N	A	I	D	E	K	T	T	I	V	W	I	C	N	P	N	N	P	T	G	N	Y	I	E	L	A	D	I	Q	A	F	L	D	R	V	P	S	D	.	.
Template Known Secondary structure						S	S												T										T	T	.	S													T	T								S	S		T	T	T														T	T	S		T	T	.	.
Template Predicted Secondary structure																															.																																																.	.
Template SS confidence
	108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

	236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I
Query Conservation
Alig confidence	.	.																									.																																														.	.	.	.	.	.	.	.
Template Conservation	.	.																									.																																														.	.	.	.	.	.	.	.
Template Sequence	.	.	V	L	V	V	L	D	E	A	Y	I	E	Y	V	T	P	Q	P	E	K	H	E	K	L	V	.	R	T	Y	K	N	L	I	I	T	R	T	F	S	K	I	Y	G	L	A	S	A	R	V	G	Y	G	I	A	D	K	E	I	I	R	Q	L	N	I	V	R	P	P	F	N	T	.	.	.	.	.	.	.	.
Template Known Secondary structure	.	.	S							T	T	G	G	G		S	S						G	G	G	G	.	G	T		T	T							S	S	S	T	T			S	S																			T			S				.	.	.	.	.	.	.	.
Template Predicted Secondary structure	.	.																									.																																														.	.	.	.	.	.	.	.
Template SS confidence
			185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

	316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L
Query Conservation
Alig confidence	.	.	.	.	.	.																																														.	.	.	.	.											.	.	.	.	.	.
Template Conservation	.	.	.	.	.	.																																														.	.	.	.	.											.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	T	S	I	G	Q	K	L	A	I	E	A	I	K	D	Q	A	F	I	G	E	C	R	T	S	N	A	N	G	I	K	Q	Y	E	A	F	A	K	R	F	E	K	V	K	L	Y	.	.	.	.	.	P	A	N	G	N	F	V	L	I	D	.	.	.	.	.	.	L	G	I	E	A	G	T	I
Template Known Secondary structure	.	.	.	.	.	.	B																																							T	T					.	.	.	.	.				S	S						.	.	.	.	.	.		S	S
Template Predicted Secondary structure	.	.	.	.	.	.																																														.	.	.	.	.											.	.	.	.	.	.
Template SS confidence
							254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.						.	300	.	.	.	.	.	.	.	.							.	310	.	.	.	.	.	.

	396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L
Query Conservation
Alig confidence																		.	.	.												.	.	.
Template Conservation																		.	.	.												.	.	.
Template Sequence	F	S	Y	L	E	K	N	G	Y	I	T	R	S	G	A	A	L	.	.	.	G	F	P	T	A	V	R	I	T	I	G	.	.	.	K	E	E	D	N	S	A	V	I	A	L	L	E	K	L	L
Template Known Secondary structure							T	T						T	T	T	T	.	.	.	T		T	T								.	.	.
Template Predicted Secondary structure																		.	.	.												.	.	.
Template SS confidence
	317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.				.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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