Job Description P69910 Confidence 99.73% Date Thu Jan 5 12:12:18 GMT 2012 Rank 179 Aligned Residues 331 % Identity 10% Template c3fdbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative plp-dependent beta-cystathionase; PDBTitle: crystal structure of a putative plp-dependent beta-cystathionase2 (aecd, dip1736) from corynebacterium diphtheriae at 1.99 a resolution Resolution 1.99 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A
Query Conservation
Alig confidence																										.	.																										.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.																										.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	P	A	V	L	Q	A	I	T	D	A	V	Q	R	E	A	F	G	Y	Q	P	D	G	S	.	.	L	L	S	Q	A	T	A	E	F	Y	A	D	R	Y	G	Y	Q	A	R	P	E	W	I	F	P	.	.	.	I	P	D	V	V	R	G	L	Y	I	A	I	D	H	F	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T			S	S			S	S		.	.																				G	G	G				.	.	.		S														.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.																										.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	P	Q	P	L	H	D
Query Conservation																																																																									.	.	.
Alig confidence		.																																					.	.	.																																.	.	.
Template Conservation		.																																					.	.	.
Template Sequence		.	T	P	A	Q	S	K	V	I	V	P	T	P	A	Y	P	P	F	F	H	L	L	S	A	T	Q	R	E	G	I	F	I	D	A	T	G	G	.	.	.	I	N	L	H	D	V	E	K	G	F	Q	A	G	A	R	S	I	L	L	C	N	P	Y	N	P	L	G	X	V	F	A	P	E	W	L	N	E	L	C	D
Template Known Secondary structure		.	S		T	T								S			T										T									T	T	S	.	.	.												T	T								S	S	B	T	T	T	T	B
Template Predicted Secondary structure		.																																					.	.	.
Template SS confidence
			101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	.	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D
Query Conservation																																																										.
Alig confidence								.	.	.	.	.	.																																													.
Template Conservation								.	.	.	.	.	.
Template Sequence		L	A	H	R	Y	D	.	.	.	.	.	.	A	R	V	L	V	D	E	I	H	A	P	L	V	F	D	G	Q	H	T	V	A	A	G	V	S	D	T	A	A	S	V	C	I	T	I	T	A	P	S	A	W	N	I	A	G	L	K	C	A	Q	I	I	F	S	N	P	S	D	A	E	H	W	Q	Q	L	S	P	V
Template Known Secondary structure						T	T	.	.	.	.	.	.								T	T	G	G	G	B	S	S	S					G	G	G	S																				G	G	G									S										S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.							.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	.	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K
Query Conservation																																																						.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																																				.																.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.
Template Sequence		I	K	D	G	A	S	.	.	.	.	.	.	.	.	.	.	.	T	L	G	L	I	A	A	E	A	A	Y	R	Y	G	T	D	F	L	N	Q	E	V	A	Y	L	K	N	N	H	D	F	L	L	H	E	I	P	K	R	I	P	G	A	K	I	T	P	X	Q	A	T	.	.	.	.	.	.	.	Y	L	X	W	I
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.																																								S	T	T							S	B		.	.	.	.	.	.	.	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.												.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.								.	310	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	.	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y
Query Conservation																									.
Alig confidence																									.												.	.								.	.
Template Conservation																																					.	.								.	.
Template Sequence		D	F	R	D	T	T	I	E	G	S	P	S	E	F	F	I	E	K	A	K	V	A	X	N	D	G	A	W	F	G	E	D	G	T	G	.	.	F	C	R	L	N	F	A	.	.	T	S	R	E	V	L	E	E	A	I	D	R	X	A	K	A	V	S	H
Template Known Secondary structure				T	T	S				S																	G	G	G	G		G	G	G	T	T	.	.								.	.	S																	T	T
Template Predicted Secondary structure																																					.	.								.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions