Job Description P69910 Confidence 99.56% Date Thu Jan 5 12:12:18 GMT 2012 Rank 218 Aligned Residues 273 % Identity 16% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																								.	.	.																																																			.	.	.	.	.
Query SS confidence																								.	.	.																																																			.	.	.	.	.
Query Sequence		N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	.	.	.	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	.	.	.	.	.
Query Conservation																								.	.	.																																																			.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.					.	.	.																	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	Y	A	S	V	F	K	T	E	A	.	.	.	.	.	.	.	A	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	L	R	.	.	.	.	.	.	.	.	.	.	.	P	G	D	E	L	L	Y	I	T	G	E	P	Y	D	T	L	E	E	I	V	G	I	R	S	E	G	Q	G
Template Known Secondary structure									T		S		.	.	.	.	.	.	.					T	T	S		S															.	.	.	.	.	.	.	.	.	.	.	T	T							S	S	S			T	T						T	S	S		S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.												.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
							174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																						.	.	.	.
Query SS confidence		.	.	.	.	.																																						.	.	.	.
Query Sequence		.	.	.	.	.	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	.	.	.	.	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A
Query Conservation		.	.	.	.	.																																						.	.	.	.
Alig confidence		.	.	.	.	.												.																										.	.	.	.																						.	.	.	.
Template Conservation																		.																																																			.	.	.	.
Template Sequence		S	L	K	D	F	Q	I	G	Y	D	A	V	P	L	L	P	.	N	G	E	I	D	Y	P	A	V	S	K	K	I	S	A	N	T	K	X	I	G	I	Q	R	S	R	G	Y	A	D	R	P	S	F	T	I	E	K	I	K	E	X	V	T	F	V	K	N	I	N	.	.	.	.	P	N	I	I	V	F	V	D	N
Template Known Secondary structure			T	G	G	G	T										T	.	T	S	S												T	T									S		T	T	S	S	S																				.	.	.	.	T	T	S
Template Predicted Secondary structure																		.																																																			.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V
Query Conservation
Alig confidence						.	.	.	.												.	.	.																																			.	.	.	.	.	.
Template Conservation						.	.	.	.												.	.	.																																			.	.	.	.	.	.
Template Sequence		C	Y	G	E	.	.	.	.	F	V	E	R	I	E	P	T	E	V	G	.	.	.	A	D	I	I	A	G	S	L	I	N	P	G	G	G	L	A	K	T	G	G	Y	I	A	G	R	N	T	L	V	D	L	C	G	Y	.	.	.	.	.	.	R	L	T	T	P	G	I	G	R	E	A	G	A	S	L	Y	S	L
Template Known Secondary structure		T	T	T	T	.	.	.	.	T	T	S	S			G	G	G	T	T	.	.	.		S									T	T	T	T	T			S																	.	.	.	.	.	.			S		T	T	T	G	G	G					T	T
Template Predicted Secondary structure						.	.	.	.												.	.	.																																			.	.	.	.	.	.
Template SS confidence
		202	.	.	.					.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W
Query Conservation
Alig confidence												.	.	.	.	.																							.																						.	.	.	.
Template Conservation												.	.	.	.	.																							.																						.	.	.	.
Template Sequence		L	E	X	Y	Q	G	F	F	L	A	.	.	.	.	.	P	H	V	T	A	Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	G	.	V	E	A	D	P	L	W	D	A	K	R	T	D	L	I	Q	S	V	S	F	H	.	.	.	.	S	K	D	K	X	I	A	F	A	Q	A	I	Q	A	A	S	P
Template Known Secondary structure												.	.	.	.	.																					T	T	.					S		T	T	S			S	S	S							S	.	.	.	.															T	S	S
Template Predicted Secondary structure												.	.	.	.	.																							.																						.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.						280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.					.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		405	.	.	.	.	410	.	.						.	.	.	.	.	.	.	420	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		Q	V	P	A	F	T	L	G	.	.	.	.	.	G	E	A	T	D	I	V	V	M
Query Conservation										.	.	.	.	.
Alig confidence		.								.	.	.	.	.
Template Conservation		.
Template Sequence		.	V	N	A	H	V	L	P	I	G	A	Y	X	P	G	Y	E	D	D	V	I	X
Template Known Secondary structure		.	S	S	T	T	S					B			T	T		S	S
Template Predicted Secondary structure		.
Template SS confidence
			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions