Job Description P69910 Confidence 99.96% Date Thu Jan 5 12:12:18 GMT 2012 Rank 40 Aligned Residues 342 % Identity 13% Template c3f0hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (rer070207000802) from2 eubacterium rectale at 1.70 a resolution Resolution 1.70 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R
Query Conservation
Alig confidence																										.	.	.	.	.																									.	.	.																								.
Template Conservation																										.	.	.	.	.																									.	.	.																								.
Template Sequence		F	T	V	G	P	V	X	S	S	E	E	V	R	A	I	G	A	E	Q	V	P	Y	F	R	.	.	.	.	.	T	T	E	F	S	S	T	X	L	E	N	E	K	F	X	L	E	Y	A	K	A	P	E	G	.	.	.	S	K	A	V	F	X	T	C	S	S	T	G	S	X	E	A	V	V	X	N	C	F	T	.
Template Known Secondary structure			S	S	S	S												T	S						S	.	.	.	.	.	S																			T			T	T	.	.	.							S	S																.
Template Predicted Secondary structure																										.	.	.	.	.																									.	.	.																								.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F
Query Conservation																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.												.																									.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	K	K	D	K	V	L	V	I	D	G	G	S	F	G	H	R	F	V	Q	L	C	E	I	H	E	I	P	Y	V	A	L	K	L	E	H	G	.	K	K	L	T	K	E	K	L	Y	E	Y	D	N	Q	N	F	T	G	L	L	V	N	V	D	E	T	S	T	A	V	L	Y	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T								S	S													T	T										T	T	.										T	T	T	T	S									S			T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
												75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L
Query Conservation
Alig confidence														.	.	.	.	.	.																	.	.	.	.	.	.	.																				.
Template Conservation														.	.	.	.	.	.																	.	.	.	.	.	.	.																				.
Template Sequence		T	X	X	I	G	E	F	C	K	K	N	N	.	.	.	.	.	.	X	F	F	V	C	D	C	V	S	A	F	L	A	D	P	F	.	.	.	.	.	.	.	N	X	N	E	C	G	A	D	V	X	I	T	G	S	Q	V	L	A	C	.	P	P	G	I	S	V	I	V	L	A	P	R	G	V	E	R	V	E	K
Template Known Secondary structure												T	T	.	.	.	.	.	.								T	T	T	T	T	T	S			.	.	.	.	.	.	.						T		S												.		S	S																T
Template Predicted Secondary structure														.	.	.	.	.	.																	.	.	.	.	.	.	.																				.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.								.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.							.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		V	F	N	V	D	Y	L	G	G	.	.	.	.	.	.	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																																																													.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		S	K	V	R	T	X	Y	F	D	L	K	D	A	L	K	N	Q	E	R	G	Q	T	P	F	T	P	A	V	G	I	L	L	Q	I	N	E	R	L	K	E	I	K	K	H	G	G	A	D	A	E	V	A	R	I	A	S	Q	A	A	D	F	R	A	K	I	K	D	L	P	F	E	L	V	S	E	.	.	.	S	P
Template Known Secondary structure							S	T	T										T	T	T			S	S																				T	T																				T	T	T	S	S						S	.	.	.	S	B
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	.	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y
Query Conservation																												.
Alig confidence											.	.	.	.	.													.																		.	.	.
Template Conservation											.	.	.	.	.																															.	.	.
Template Sequence		A	N	G	V	T	S	V	H	P	.	.	.	.	.	T	T	A	N	A	Y	D	I	F	L	K	L	K	D	E	Y	G	I	W	I	C	P	N	G	G	E	X	K	D	T	.	.	.	I	F	R	V	G	H	I	G	A	L	T	H	E	D	N	T	T	L	V	N	A	F	K	D	L	Q	K	R
Template Known Secondary structure		B	T	T							.	.	.	.	.	S	S	S													S	S								G	G	G	T	T	T	.	.	.								S	S																			T
Template Predicted Secondary structure											.	.	.	.	.																															.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.						.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions