Job Description P69910 Confidence 99.94% Date Thu Jan 5 12:12:18 GMT 2012 Rank 70 Aligned Residues 345 % Identity 12% Template c3dr4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative perosamine synthetase; PDBTitle: gdp-perosamine synthase k186a mutant from caulobacter2 crescentus with bound sugar ligand Resolution 1.60 Å

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		63	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		F	C	Q	T	W	.	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W
Query Conservation							.
Alig confidence							.																							.								.	.	.	.												.	.	.	.	.	.	.
Template Conservation																														.								.	.	.	.												.	.	.	.	.	.	.
Template Sequence		S	V	A	A	P	R	L	D	G	N	E	R	D	Y	V	L	E	C	M	D	T	T	W	I	S	S	V	G	.	R	F	I	V	E	F	E	.	.	.	.	K	A	F	A	D	Y	C	G	V	K	H	.	.	.	.	.	.	.	A	I	A	C	N	N	G	T	T	A	L	H	L	A	L	V	A	M	G	I	G	P
Template Known Secondary structure			S							S	S												T			S	S		S	.								.	.	.	.								T		S		.	.	.	.	.	.	.					S														T			T
Template Predicted Secondary structure																														.								.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template Sequence		G	D	E	.	.	.	.	.	.	.	.	.	.	.	V	I	V	P	S	L	T	Y	I	A	S	A	N	S	V	T	Y	C	G	A	T	P	V	L	V	D	N	D	P	R	T	F	N	L	D	A	A	K	L	E	A	L	I	T	P	R	T	.	.	.	K	A	I	M	P	V	H	L	Y	G	Q	I	C	D	M	D
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	.	.					S	S	S		T									T	T								B		T	T	T		S	B		G	G	G	T	G	G	G			T	T		.	.	.						B		G	G	G
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template SS confidence
		76	.	.												.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F
Query Conservation
Alig confidence												.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		P	I	L	E	V	A	R	R	H	N	.	.	.	.	.	.	L	L	V	I	E	D	A	A	E	A	V	G	A	T	Y	R	G	K	K	.	.	.	.	.	.	S	G	S	L	G	D	C	A	T	F	S	F	F	G	N	A	I	I	T	T	G	E	G	G	M	I	T	T	N	D	D	D	L	A	A	K	M	R	L
Template Known Secondary structure										T	T	.	.	.	.	.	.								T	T		T	T				T	T			.	.	.	.	.	.	T	T	S	S	S	S							B	T	T	S	S	S			B	S							S
Template Predicted Secondary structure												.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.							.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	G	Q	G	M	D	P	N	R	R	Y	W	F	P	I	V	G	F	N	Y	R	M	T	N	I	Q	A	A	I	G	L	A	Q	L	E	R	V	D	E	H	L	A	A	R	E	R	V	V	G	W	Y	E	Q	K	L	A	R	L	G	N	R	V	T	K	P	H	V	A	L	T	G	R	H	V	F	W	M	Y	T
Template Known Secondary structure				B	T	T			T	T	S	T	T			S	S				B		B															T																			G	G	G	G	G	G	G								T	T	S					S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.																		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	L	G	E	G	L	S	T	T	R	D	Q	V	I	K	D	L	D	A	L	G	I	E	S	R	P	V	F	H	P	M	H	I	M	P	P	Y	A	H	L	A	T	D	D	L	K	I	A	E	A	C	G	V	D	G	L	N	L	P	T	H	A	G	L	T	E	A	D	I	D	R	V	I	A	A	L	D	Q	V
Template Known Secondary structure						T	T		S	S												T	T	B									G	G	G	S	G	G	G	G	G	G			T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		445
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions