Job Description P69910 Confidence 98.87% Date Thu Jan 5 12:12:18 GMT 2012 Rank 235 Aligned Residues 286 % Identity 10% Template c3bwnF_ PDB info PDB header:transferase Chain: F: PDB Molecule:l-tryptophan aminotransferase; PDBTitle: l-tryptophan aminotransferase Resolution 2.25 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L
Query Conservation
Alig confidence																							.	.																					.	.	.	.	.	.	.	.
Template Conservation																							.	.																					.	.	.	.	.	.	.	.
Template Sequence		E	D	A	I	K	D	L	H	G	V	V	G	N	A	A	T	E	D	R	Y	I	.	.	V	V	G	T	G	S	T	Q	L	C	Q	A	A	V	H	A	L	S	S	L	.	.	.	.	.	.	.	.	A	R	S	Q	P	V	S	V	V	A	A	A	P	F	Y	S	T	Y	V	E	E	T	T	Y	V	R	S	G	M
Template Known Secondary structure														S	B			T	T	S			.	.																					.	.	.	.	.	.	.	.	S	S	S	S	S							S	S											T	T			T	T
Template Predicted Secondary structure																							.	.																					.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.				.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.				.	.	.	.	.	.										.	.	.	.	.	.	.
Template Sequence		Y	K	W	E	G	D	A	W	G	.	.	.	.	.	.	.	.	.	.	F	D	K	K	G	P	Y	I	E	L	V	T	S	P	N	N	P	D	G	T	I	R	E	.	.	.	.	.	.	.	.	.	T	V	V	.	.	.	.	.	.	A	K	V	I	H	D	F	A	Y	.	.	.	.	.	.	.	Y	W	P	H
Template Known Secondary structure								S	T	T	.	.	.	.	.	.	.	.	.	.				S	S								S	S		T	T	T						.	.	.	.	.	.	.	.	.				.	.	.	.	.	.								T	T	.	.	.	.	.	.	.		S	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.				.	.	.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.											.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.										.	.	.							.	180	.	.	.	.	.	.	.								.	.	190	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																										.																																																					.	.	.
Query SS confidence																										.																																																					.	.	.
Query Sequence		I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	.	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	.	.	.
Query Conservation																										.																																																					.	.	.
Alig confidence																										.																							.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	P	I	T	R	R	Q	D	H	D	I	M	L	F	T	F	S	K	I	T	G	H	A	G	S	R	I	G	W	A	L	V	K	D	K	E	V	A	K	K	M	V	E	Y	I	I	.	.	.	.	.	.	.	.	.	.	V	N	S	I	G	V	S	K	E	S	Q	V	R	T	A	K	I	L	N	V	L	K	E
Template Known Secondary structure		T	S				S		B			S													G	G	G																						.	.	.	.	.	.	.	.	.	.				S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.											.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
								334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.							380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure		.	.	.	.	.	.																																															.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																															.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	.	.	.	.	.	.	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L
Query Conservation		.	.	.	.	.	.																																															.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																															.	.	.	.	.	.												.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		T	C	K	S	E	S	E	S	E	N	F	F	K	Y	G	R	E	M	M	K	N	R	W	E	K	L	R	E	V	V	K	E	S	D	A	F	T	L	P	K	Y	P	E	A	F	C	N	Y	F	G	K	S	L	E	S	Y	P	A	F	A	W	L	G	T	K	E	E	T	D	.	.	.	.	L	V	S	E	L	R	R
Template Known Secondary structure				T			S	T	T	T	S																						T	S	S	S												T	T	T	T								S							S	S	S			.	.	.	.							T
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.
		402	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		R	G	W	Q	V	.	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S
Query Conservation							.
Alig confidence							.						.	.	.													.	.
Template Conservation													.	.	.													.	.
Template Sequence		H	K	V	M	S	R	A	G	E	R	C	.	.	.	G	S	D	K	K	H	V	R	V	S	M	L	.	.	S	R	E	D	V	F	N	V	F	L	E	R	L	A	N	M
Template Known Secondary structure		T	T						T	G	G	G	.	.	.	T	S		T	T						S		.	.	S															T
Template Predicted Secondary structure													.	.	.													.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions