Job Description P69910 Confidence 99.68% Date Thu Jan 5 12:12:18 GMT 2012 Rank 193 Aligned Residues 347 % Identity 13% Template c3bs8A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate 1-semialdehyde aminotransferase2 complexed with pyridoxamine-5'-phosphate from bacillus subtilis Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		Y	L	D	G	N	A	R	Q	N	L	A	T	F	C	Q	T	W	.	.	.	.	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																															.	.	.	.													.	.	.	.	.	.
Template Conservation																																																					.	.	.	.													.	.	.	.	.	.
Template Sequence		D	I	D	G	N	E	Y	I	D	Y	V	L	S	W	G	P	L	I	L	G	H	T	N	D	R	V	V	E	S	L	K	K	V	A	E	Y	G	T	S	F	G	A	P	T	E	V	E	N	E	L	A	.	.	.	.	K	L	V	I	D	R	V	P	S	V	E	I	.	.	.	.	.	.	V	R	M	V	S	S	G
Template Known Secondary structure			T	T							S	S	G	G	G	T	T		T	T		B	S																S			S	S										.	.	.	.							S	T	T		S		.	.	.	.	.	.					S
Template Predicted Secondary structure																																																					.	.	.	.													.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.														190	.	.
Predicted Secondary structure																																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	K
Query Conservation																																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.							.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	A	T	M	S	A	L	R	L	A	R	G	Y	T	G	R	N	K	.	.	.	.	.	.	.	.	.	.	I	L	K	F	E	G	C	Y	H	G	H	G	D	S	L	L	I	K	A	G	S	G	V	A	T	L	G	L	P	D	S	P	G	V	P	E	G	I	A	K	N	T	I	T	V	P	Y	N	D	L	E
Template Known Secondary structure																	T				.	.	.	.	.	.	.	.	.	.						T					S		G	G	G						S	S	S	S		B				S	S	T	T			T	T	S	S	T	T						T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.											.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure									.	.	.																					.	.	.	.
Query SS confidence									.	.	.																					.	.	.	.
Query Sequence		R	M	I	E	A	C	D	.	.	.	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P
Query Conservation									.	.	.																					.	.	.	.
Alig confidence									.	.	.																					.	.	.	.													.	.	.	.	.	.																											.	.
Template Conservation																																																.	.	.	.	.	.																											.	.
Template Sequence		S	V	K	L	A	F	Q	Q	F	G	E	D	I	A	G	V	I	V	E	P	V	A	G	N	M	G	V	V	P	P	Q	E	G	F	L	Q	G	L	R	D	I	T	E	Q	Y	G	.	.	.	.	.	.	S	L	L	I	F	D	E	V	M	T	G	F	R	V	D	Y	N	C	A	Q	G	Y	F	G	V	T	.	.
Template Known Secondary structure											G	G	G								S	S	B		S	S	S		B				T	T													T	.	.	.	.	.	.								T	T	T	T	T	T	T	S	T	T						T	T			.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.																											.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.							.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A
Query Conservation
Alig confidence		.														.	.										.																					.	.	.	.	.	.	.
Template Conservation		.														.	.										.																					.	.	.	.	.	.	.
Template Sequence		.	P	D	L	T	C	L	G	K	V	I	G	G	G	.	.	L	P	V	G	A	Y	G	G	K	.	A	E	I	M	E	Q	I	A	P	S	G	P	I	Y	Q	A	G	T	L	S	.	.	.	.	.	.	.	G	N	P	L	A	M	T	A	G	L	E	T	L	K	Q	L	T	P	D	S	Y	K	N	F	I	K	K
Template Known Secondary structure		.		S						G	G	G	G	T	T	.	.	S	S								.					T	T	B	T	T	T	S	S	B					S	S	T	.	.	.	.	.	.	.	T														T
Template Predicted Secondary structure		.														.	.										.																					.	.	.	.	.	.	.
Template SS confidence
			261	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.								.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.										.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	.	.	.	.	.	.	.	.	.	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T
Query Conservation																																																	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.																					.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																								.	.	.	.	.																																																	.	.	.	.	.
Template Sequence		G	D	R	L	E	E	G	I	S	K	A	A	E	A	H	G	I	P	H	T	F	N	.	.	.	.	.	R	A	G	S	M	I	G	F	F	F	T	N	E	P	V	I	N	Y	E	T	A	K	A	S	D	L	K	L	F	A	S	Y	Y	K	G	M	A	N	E	G	V	F	L	P	P	S	Q	F	.	.	.	.	.
Template Known Secondary structure																T	T							.	.	.	.	.			T	T						S	S	S	S				S					T	T	S															T	T					S	S	S	S	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.																																																	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.						.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	G	L	F	L	S	T	A	H	T	D	E	D	I	E	N	T	I	Q	A	A	E	K	V	F	A	E	I	S	R
Template Known Secondary structure		.	.	.	.	S		B				T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low