Job Description P69910 Confidence 99.86% Date Thu Jan 5 12:12:18 GMT 2012 Rank 103 Aligned Residues 268 % Identity 13% Template c2x3lA_ PDB info PDB header:lyase Chain: A: PDB Molecule:orn/lys/arg decarboxylase family protein; PDBTitle: crystal structure of the orn_lys_arg decarboxylase family2 protein sar0482 from methicillin-resistant staphylococcus3 aureus Resolution 2.00 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Template Sequence		F	L	V	N	G	T	T	S	G	I	L	S	V	I	Q	S	F	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	K	K	G	D	I	L	M	A	R	N	V	H	K	S	V	L	H	A	L	D	I	S	Q	Q	E	G	H	F	I	E	T	H	Q	S	P	L	.	.	.	.	.	T	N	H	Y	N	K	V	N
Template Known Secondary structure				S	S												T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	S						T	T													T												T	T	.	.	.	.	.	T	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.													.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A
Query Conservation
Alig confidence												.																					.	.	.	.	.	.													.	.	.																									.
Template Conservation												.																					.	.	.	.	.	.													.	.	.																									.
Template Sequence		L	H	K	L	V	V	L	T	Y	P	.	N	Y	Y	G	E	T	F	N	V	E	E	V	I	K	S	L	H	Q	L	N	.	.	.	.	.	.	I	P	V	L	I	D	E	A	H	G	A	H	.	.	.	F	G	L	Q	G	F	P	D	S	T	L	N	Y	Q	A	D	Y	V	V	Q	S	F	H	T	.	L	P	A
Template Known Secondary structure										S	S	.		T	T	S															T	T	.	.	.	.	.	.								T	T		T	T	.	.	.	T	T	S	T	T	S				G	G	G	G	T		S									.		S	S
Template Predicted Secondary structure												.																					.	.	.	.	.	.													.	.	.																									.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.																																		.	.	.	.
Template Sequence		L	T	M	G	S	V	L	Y	I	H	K	N	A	P	Y	R	E	N	I	I	E	Y	L	S	Y	F	Q	T	S	S	P	S	Y	L	I	.	.	.	.	.	.	.	.	M	A	S	L	E	S	A	A	Q	F	Y	K	T	Y	D	S	T	L	F	F	A	K	R	A	Q	L	I	E	C	L	E	N	K	.	.	.	.
Template Known Secondary structure			T	T								T	T		T	T												S		S	S						.	.	.	.	.	.	.	.																																		.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.																																		.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250									.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D
Query Conservation
Alig confidence		.												.	.	.	.							.	.	.	.	.																							.	.	.	.	.
Template Conservation		.												.	.	.	.							.	.	.	.	.																							.	.	.	.	.
Template Sequence		.	G	F	E	M	L	Q	V	D	D	P	L	.	.	.	.	K	L	L	I	K	Y	.	.	.	.	.	E	G	F	T	G	H	D	I	Q	N	W	F	M	N	A	H	I	Y	L	E	L	A	.	.	.	.	.	D	D	Y	Q	A	L	A	I	L	P	L	W	H	H	D	D	T	Y	L	F	D	S	L	L	R	K
Template Known Secondary structure		.	T							S	S	T	T	.	.	.	.							.	.	.	.	.	T	T	S												T	T				S			.	.	.	.	.		S	S											T	T
Template Predicted Secondary structure		.												.	.	.	.							.	.	.	.	.																							.	.	.	.	.
Template SS confidence
			284	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300						.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.						.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		441	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	D
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		349	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions