Phyre 2 alignment of P69910 with c2po3B

Job Description P69910
Confidence 99.96% Date Thu Jan 5 12:12:18 GMT 2012

Rank 47 Aligned Residues 361

% Identity 16% Template c2po3B_

PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product

Resolution 2.10 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	48	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence	D	E	L	Y	L	D	G	N	A	R	.	.	.	.	Q	N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																													.														.	.	.	.										.	.	.	.	.	.	.
Template Conservation																																											.														.	.	.	.										.	.	.	.	.	.	.
Template Sequence	S	D	L	A	F	F	G	G	P	A	A	F	D	Q	P	L	L	V	G	R	P	N	R	I	D	R	A	R	L	Y	E	R	L	D	R	A	L	D	S	Q	W	L	.	S	N	G	G	P	L	V	R	E	F	E	E	R	.	.	.	.	V	A	G	L	A	G	V	R	H	.	.	.	.	.	.	.	A	V	A	T
Template Known Secondary structure	G	G	S	G	G	G	T	S			S		S	S				T	T																					T			.	S	S	S											.	.	.	.						T	S	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.														.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
	2006	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.		.	.	2050	.	.	.	.	.	.	.	.	.	2060					.	.	.	.	.	.	.	.	.								2070	.	.	.

	124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	C	N	A	T	A	G	L	Q	L	L	A	H	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	G	E	V	I	M	P	S	M	T	F	A	A	T	P	H	A	L	R	W	I	G	L	T	P	V	F	A	D	I	D	P	D	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	P	R	T	S
Template Known Secondary structure	S														.	.	.	.	.	.	.	.	.	.	.	.	.	T			S						S	S	S		T									T	T								B		T	T	T	S	S	B		S	T	T							T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	2074	.	.	.	.	.	2080	.	.	.	.	.	.	.														.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140

	204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G
Query Conservation
Alig confidence				.	.	.																							.	.	.	.	.	.																						.	.	.	.																		.
Template Conservation				.	.	.																							.	.	.	.	.	.																						.	.	.	.																		.
Template Sequence	A	V	V	.	.	.	G	V	H	L	W	G	R	P	C	A	A	D	Q	L	R	K	V	A	D	E	H	G	.	.	.	.	.	.	L	R	L	Y	F	D	A	A	H	A	L	G	C	A	V	D	G	R	P	A	G	.	.	.	.	S	L	G	D	A	E	V	F	S	F	H	A	T	K	A	V	N	.	A	F	E
Template Known Secondary structure				.	.	.				G	G	G																T	.	.	.	.	.	.								T	T		T	T				T	T			T	T	.	.	.	.	S	S	S	S	S							T	T	S	S	S		.		S	S
Template Predicted Secondary structure				.	.	.																							.	.	.	.	.	.																						.	.	.	.																		.
Template SS confidence
	2141	.	.				.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.							.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.					.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.		.	.	.

	284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y
Query Conservation
Alig confidence																																						.														.	.
Template Conservation																																						.														.	.
Template Sequence	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H	N	F	G	F	D	L	P	G	G	S	P	A	G	G	T	N	A	K	.	M	S	E	A	A	A	A	M	G	L	T	S	L	.	.	D	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V
Template Known Secondary structure							S												T	B	T	T	T	T		T	T			T	T				B		B	.														.	.																					T		S		T	T
Template Predicted Secondary structure																																						.														.	.
Template SS confidence
	2207	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.		.	.	.	.	.	.	2250	.	.	.	.	.	.			.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.

	364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.																			.	420	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	M	R	I	M	C
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E	A	T	T	G	I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T
Template Known Secondary structure					G	G	G	G	S	B																S	S												T	T				B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T
Template Predicted Secondary structure
Template SS confidence
	2284	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.

	426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y	L	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C	A	T	R	G	R	E
Template Known Secondary structure	S	T	T																			S
Template Predicted Secondary structure
Template SS confidence
	2364	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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