Job Description P69910 Confidence 99.80% Date Thu Jan 5 12:12:18 GMT 2012 Rank 146 Aligned Residues 347 % Identity 12% Template c2ordA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution Resolution 1.40 Å

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		51	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		Y	L	D	G	N	A	R	Q	N	L	A	T	.	.	.	.	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																														.	.																			.	.	.	.	.	.	.
Template Conservation																																															.	.																			.	.	.	.	.	.	.
Template Sequence		D	E	K	G	N	A	Y	L	D	F	T	S	G	I	A	V	N	V	L	G	H	S	H	P	R	L	V	E	A	I	K	D	Q	A	E	K	L	I	H	C	S	N	L	F	W	.	.	N	R	P	Q	X	E	L	A	E	L	L	S	K	N	T	F	G	G	.	.	.	.	.	.	.	K	V	F	F	A	N	T	G
Template Known Secondary structure			T	T							S	S					T		T	T		B	T																S				T	T	S		.	.														T	T	T	S		.	.	.	.	.	.	.						S	S
Template Predicted Secondary structure																																															.	.																			.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.								.	.	.	90	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																								.	.	.	.	.	.
Query SS confidence																																					.																								.	.	.	.	.	.
Query Sequence		S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	.	.	.	.	.	.	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D
Query Conservation																																					.																								.	.	.	.	.	.
Alig confidence																				.	.	.	.	.													.																								.	.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		T	E	A	N	E	A	A	I	K	I	A	R	K	Y	G	K	K	K	.	.	.	.	.	S	E	K	K	Y	R	I	L	S	A	H	N	S	F	H	G	R	T	L	G	S	L	T	A	T	G	Q	P	K	Y	Q	K	P	F	E	P	L	V	P	G	F	E	Y	F	E	F	N	N	V	E	D	L	R	R	K	X	S
Template Known Secondary structure																				.	.	.	.	.		T	T								B	T					S	S							S	B						G	G	G		S			T	T						T	T
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	.	.	.	.	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.													.	.	.	.	.	.												.	.	.	.
Template Conservation																																						.	.	.	.	.	.												.	.	.	.
Template Sequence		E	D	V	C	A	V	F	L	E	P	I	Q	G	E	S	G	I	V	P	A	T	K	E	F	L	E	E	A	R	K	L	C	D	E	Y	D	.	.	.	.	.	.	A	L	L	V	F	D	E	V	Q	C	G	.	.	.	.	X	G	R	T	G	K	L	F	A	Y	Q	K	Y	G	V	V	P	D	V	L	T	T	A
Template Known Secondary structure		T	T								S				T	T	T																				T	.	.	.	.	.	.								T	T	T	T	.	.	.	.	T	T	T	T	S	S	S	S						T				S
Template Predicted Secondary structure																																						.	.	.	.	.	.												.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	L	G	G	G	V	P	I	G	A	V	I	V	N	E	R	A	N	V	.	.	.	.	.	.	.	.	.	.	.	L	E	P	G	D	H	G	T	T	F	G	G	N	P	L	A	C	R	A	G	V	T	V	I	K	E	L	T	K	E	G	F	L	E	E	V	E	E	K	G	N	Y	L	X	K	K	L	Q	E
Template Known Secondary structure		G	G	G	G	T	T	S									S	T	T			.	.	.	.	.	.	.	.	.	.	.			T	T	S	S			S	S	T	T																T	S	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.												260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E
Query Conservation
Alig confidence														.	.	.	.	.												.	.	.	.																							.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.												.	.	.	.																							.	.	.	.	.	.	.
Template Sequence		X	K	E	E	Y	D	V	V	A	D	V	R	.	.	.	.	.	G	X	G	L	X	I	G	I	Q	F	R	.	.	.	.	E	E	V	S	N	R	E	V	A	T	K	C	F	E	N	K	L	L	V	V	P	A	.	.	.	.	.	.	.	G	N	N	T	I	R	F	L	P	P	L	T	V	E	Y	G	E	I	D
Template Known Secondary structure							T	T						.	.	.	.	.			T	T								.	.	.	.	T	T	S												T	T							.	.	.	.	.	.	.	T	T	T								T	T
Template Predicted Secondary structure														.	.	.	.	.												.	.	.	.																							.	.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320						.	.	.	.	.	.	.	.	.	330	.					.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.								.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	E	D	Y	K	A	S	L	K	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	V	E	T	L	K	K	V	L	Q	G	I
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions