Job Description P69910 Confidence 99.87% Date Thu Jan 5 12:12:18 GMT 2012 Rank 98 Aligned Residues 293 % Identity 15% Template c2nmpC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine gamma-lyase; PDBTitle: crystal structure of human cystathionine gamma lyase Resolution 2.60 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.
Predicted Secondary structure																																																																													.	.	.	.
Query SS confidence																																																																													.	.	.	.
Query Sequence		P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	.	.	.	.	W
Query Conservation																																																																													.	.	.	.
Alig confidence											.	.	.	.										.	.	.	.	.	.	.												.							.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation											.	.	.	.										.	.	.	.	.	.	.												.							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	R	N	C	L	E	K	A	.	.	.	.	V	A	A	L	D	G	A	K	Y	.	.	.	.	.	.	.	C	L	A	F	A	S	G	L	A	A	T	.	V	T	I	T	H	L	.	.	.	.	.	.	.	.	.	.	.	.	L	K	A	G	D	Q	I	I	C	M	D	D	V	Y	G	G	T	N	R	Y	F
Template Known Secondary structure											.	.	.	.					T	T		S		.	.	.	.	.	.	.					S	S						.					T	T	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T							S	S
Template Predicted Secondary structure											.	.	.	.										.	.	.	.	.	.	.												.							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.								.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100													.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S
Query Conservation
Alig confidence																			.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation																			.	.	.	.	.	.																																											.	.	.	.	.
Template Sequence		R	Q	V	A	S	E	F	G	L	K	I	S	F	V	D	C	S	.	.	.	.	.	.	K	I	K	L	L	E	A	A	I	T	P	E	T	K	L	V	W	I	E	T	P	T	N	P	T	Q	K	V	I	D	I	E	G	C	A	H	I	V	H	K	H	G	.	.	.	.	.	D	I	I	L	V	V	D	N	T	F
Template Known Secondary structure				T	G	G	G	T	T									S	.	.	.	.	.	.	S										T	T								S	S		T	T	T														T	T	S	S	.	.	.	.	.	S								T	T
Template Predicted Secondary structure																			.	.	.	.	.	.																																											.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	.	.	G	W	V	I	W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V
Query Conservation																																								.	.
Alig confidence								.	.	.	.	.	.	.	.																									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	S	P	Y	F	Q	.	.	.	.	.	.	.	.	R	P	L	A	L	G	A	D	I	S	M	Y	S	A	T	K	Y	M	N	G	H	S	D	V	V	M	G	L	V	S	V	N	C	E	S	L	H	N	R	L	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	N	S	L	G	A	V	P	S	P
Template Known Secondary structure		T						.	.	.	.	.	.	.	.		T	T	T	T	T		S						T	T	T	T	T	T		S	S	S																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.														.	240	.	.	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.														.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation												.	.																																																														.	.	.
Template Sequence		I	D	C	Y	L	C	N	R	G	L	.	.	K	T	L	H	V	R	M	E	K	H	F	K	N	G	M	A	V	A	Q	F	L	E	S	N	P	W	V	E	K	V	I	Y	P	G	L	P	S	H	P	Q	H	E	L	V	K	R	Q	C	T	G	C	T	G	M	V	T	F	Y	I	K	G	.	.	.	T	L	Q	H
Template Known Secondary structure												.	.	T	T																					T		T	T							T	T	S	T	T	S	T	T									S	S			S							S	S	.	.	.
Template Predicted Secondary structure												.	.																																																														.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.	.	.
		392	.	.	.	.	.	.	.	400																					.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	D	L	S	E	R	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	I	F	L	K	N	L	K	L	F	T	L	A	E	S	L	G	G	F	E	S	L	A	E	L	P	A	I	M	T	H	A	S	V	L	K	N	D	R	D	V	L	G	I	S	D	T	L	I	R	L	S	V	G	L	E	D	E	E	D	L	L	E	D	L	D	Q	A	L	K	A	A
Template Known Secondary structure										S	S	S				S			S	S	S	S						G	G	G	T	T	T	T	T	S									T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions