Job Description P69910 Confidence 99.97% Date Thu Jan 5 12:12:18 GMT 2012 Rank 35 Aligned Residues 349 % Identity 13% Template c2fyfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:phosphoserine aminotransferase; PDBTitle: structure of a putative phosphoserine aminotransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	R	Q	N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G
Query Conservation
Alig confidence																																																													.	.	.
Template Conservation																																																													.	.	.
Template Sequence		K	P	R	D	G	R	F	G	S	G	P	S	K	V	R	L	E	Q	L	Q	T	L	T	T	T	A	A	A	L	F	G	T	S	H	R	Q	A	P	V	K	N	L	V	G	R	V	R	S	G	L	A	E	L	F	S	L	P	D	G	.	.	.	Y	E	V	I	L	G	N	G	G	A	T	A	F	W	D	A	A	A
Template Known Secondary structure		S		S			B			S	S	S									G	G	G	G	T	T	T	G	G	G	T	T	S		T	T	S																		T	T			T	T	.	.	.								T
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Template Sequence		F	G	L	.	.	.	.	.	.	.	.	.	.	.	.	I	D	K	R	S	L	H	L	T	Y	G	E	F	S	A	K	F	A	S	A	V	S	K	N	P	F	V	G	E	P	I	I	I	T	S	D	P	G	S	A	P	.	.	.	.	E	P	Q	T	D	P	S	V	D	V	I	A	W	A	H	N	E	T	S	T
Template Known Secondary structure				T	.	.	.	.	.	.	.	.	.	.	.	.		S	S								S														T	T	S										T	T				.	.	.	.						T	T		S						S			T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Template SS confidence
		93	.	.													.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A
Query Conservation
Alig confidence											.	.	.	.					.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.					.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	A	V	A	V	R	R	P	.	.	.	.	E	G	S	D	.	.	.	.	.	.	A	L	V	V	I	D	A	T	S	G	A	G	G	L	P	V	.	.	.	.	.	.	.	.	.	D	I	A	E	T	D	A	Y	Y	F	A	P	Q	K	N	F	A	S	D	G	G	L	W	L	A	I	M	S	P	A	A	L
Template Known Secondary structure		T									.	.	.	.	T	T			.	.	.	.	.	.								T	T	T	T	T	T	S			.	.	.	.	.	.	.	.	.		G	G	G		S						T	T	S	T	T		S		S	S
Template Predicted Secondary structure											.	.	.	.					.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.					.	.	.	.							170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.										.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310											.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	.	.	.	.	.	.	.	.	.	.	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	.	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y
Query Conservation																		.	.	.	.	.	.	.	.	.	.																													.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																													.
Template Conservation
Template Sequence		S	R	I	E	A	I	A	A	T	G	R	W	V	P	D	F	L	S	L	P	I	A	V	E	N	S	L	K	N	Q	T	Y	N	T	P	A	I	A	T	L	A	L	L	A	E	Q	I	D	W	L	V	G	N	G	G	L	D	W	A	V	K	R	T	A	D	S	S	Q	R	L	Y	S	W	A	Q	E	R	P	Y	T
Template Known Secondary structure										T	T					G	G	G										T	T	T			S	S																				T	T	S																						S	T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	I	C	T	G	R	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A
Query Conservation
Alig confidence																						.	.	.	.																														.	.	.
Template Conservation																						.	.	.	.																														.	.	.
Template Sequence		T	P	F	V	T	D	P	G	L	R	S	Q	V	V	G	T	I	D	F	V	.	.	.	.	D	D	V	D	A	G	T	V	A	K	I	L	R	A	N	G	I	V	D	T	E	P	Y	R	K	L	G	R	N	.	.	.	Q	L	R	V	A	M	F	P	A	V	E	P	D	D	V	S	A	L	T	E	C	V	D	W
Template Known Secondary structure				S			S	G	G	G	B		S	S								.	.	.	.	T	T	S												T	T		B			S			T	T	T			S	.	.	.								T	T	S
Template Predicted Secondary structure																						.	.	.	.																														.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		444	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	K	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	E	R	L
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions