Job Description P69910 Confidence 99.83% Date Thu Jan 5 12:12:18 GMT 2012 Rank 126 Aligned Residues 329 % Identity 10% Template c1i41J_ PDB info PDB header:lyase Chain: J: PDB Molecule:cystathionine gamma-synthase; PDBTitle: cystathionine gamma-synthase in complex with the inhibitor2 appa Resolution 3.20 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	R	Q	N	L	A	T	F	C	Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G
Query Conservation
Alig confidence																																															.	.	.	.										.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.										.	.	.	.	.	.	.
Template Sequence		T	T	P	V	V	N	T	S	A	Y	F	F	N	K	T	S	E	L	I	D	F	K	E	K	R	R	A	S	F	E	Y	G	R	Y	G	N	P	T	T	V	V	L	E	E	K	.	.	.	.	I	S	A	L	E	G	A	E	S	.	.	.	.	.	.	.	T	L	L	M	A	S	G	M	C	A	S	T	V	M	L
Template Known Secondary structure		S							S	B				S										T	T	S	S					B	G	G	G												.	.	.	.						T		S		.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																															.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.								.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.																																			.
Query SS confidence																																	.	.	.	.																																			.
Query Sequence		M	A	M	K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	V	Q	I	C	.	.	.	.	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	.	E	N	T	I	G	V	V	P	T	F
Query Conservation																																	.	.	.	.																																			.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.																			.	.	.	.	.	.											.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		L	A	L	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	G	G	H	I	V	T	T	T	D	C	Y	R	K	T	R	I	F	I	E	T	I	L	P	K	M	G	I	T	A	T	V	I	D	P	A	.	.	.	.	.	.	D	V	G	A	L	E	L	A	L	N	Q	K	K	V	N	L	F	F	T	E	S
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	S		T	T							S	S												T	G	G	G	G	T								S	S	.	.	.	.	.	.												S									S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
		147	.	.													150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		G	V	T	Y	T	G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	.	G	W	V	I
Query Conservation																																																																													.
Alig confidence																								.	.	.	.	.	.																		.	.	.	.	.	.	.	.																							.
Template Conservation																								.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		P	T	N	P	F	L	R	C	V	D	I	E	L	V	S	K	L	C	H	E	K	G	.	.	.	.	.	.	A	L	V	C	I	D	G	T	F	A	T	P	L	N	Q	K	A	.	.	.	.	.	.	.	.	L	A	L	G	A	D	L	V	L	H	S	A	T	K	F	L	G	G	H	N	D	V	L	A	G	C	I
Template Known Secondary structure		S		T	T	T																T	T	.	.	.	.	.	.								T	T	T							T	.	.	.	.	.	.	.	.	T	T	T	T		S						T	T	T	T	T	T		S	S	S
Template Predicted Secondary structure																								.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.									.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	D	E	E	A	L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		S	G	P	L	K	L	V	S	E	I	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	H	I	L	G	G	A	L	N	P	N	A	A	Y	L	I	I	R	G	M	.	.	K	T	L	H	L	R	V	Q	Q	Q	N	S	T	A	L	R	M	A	E	I	L	E	A	H	P	K	V	R	H	V	Y	Y
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.						T																.	.	T	T																							S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.														.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		369	370														.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.																					.	.	.	410	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	E	G	I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	F	T	L	G	G	E	A
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.
Template Sequence		P	G	L	Q	S	H	P	E	H	H	I	A	K	K	Q	M	T	G	F	G	G	A	V	S	F	E	V	D	G	.	.	.	D	L	L	T	T	A	K	F	V	D	A	L	K	I	P	Y	I	A	P	S	F	G	G	C	E	S	I	V	D	Q	P	A	I	M	S	Y	W	D	L	S	Q	S	D	R	A	K	Y	G
Template Known Secondary structure		T	T	S	T	T	S	T	T									S				S							S	S	.	.	.													S	S	S			S	S				S	S	S												T	T	S							T	T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	I	V	V	M	R	I	M	C	R	R	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	M	D	N	L	V	R	F	S	F	G	V	E	D	F	D	D	L	K	A	D	I	L	Q	A	L	D	S	I
Template Known Secondary structure				S	S								S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions