Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9G2
Confidence58.06%DateThu Jan 5 11:10:07 GMT 2012
Rank335Aligned Residues46
% Identity15%Templated1s7oa_
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like
Resolution2.31

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10....... ..20.........30.........40........
Predicted Secondary structure 




.




Query SS confidence 














.






























Query Sequence  MSHINYNHLYYFWHV. YKEGSVVGAAEALYLTPQTITGQIRALEERL
Query Conservation 
  
 
  
  
  
.    
 
 

  
 






  
  

  
Alig confidence 














.






























Template Conservation    

   

 

 
     

  


  



  

   
 

 
 
Template Sequence  AALLTDKQMNYIELYYADDYSLAEIADEFGVSRQAVYDNIKRTEKIL
Template Known Secondary structure  GGGS
T


T

Template Predicted Secondary structure 








Template SS confidence 














































   20.........30.........40.........50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions