Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9G2
Confidence78.51%DateThu Jan 5 11:10:07 GMT 2012
Rank246Aligned Residues176
% Identity10%Templated1lsta_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140.........150.........160.........170.........180.........190...
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Query Sequence  LNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPPEKPFPACLEERR
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Template Sequence  LGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGK
Template Known Secondary structure  T


GGGTTS
S
SS
B



S
SB


TT



SSTT
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   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   194.....200.........210.........220.........230......... 240.........250....... ..260....
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Query Sequence  LLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNA. IFVAPTLYAYDFYADKTV. . . . . . . . VEIGRVE
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Template Sequence  HVGVLQGSTQEAYANDNWRTKGVD. . . VVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKK
Template Known Secondary structure  TTSTGGGT
...SSTTS
STTTSGGGTT
SS
B

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   113......120.........130...... ...140.........150.........160.........170.........180.........
 
   265....270.........280.........290.....
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Query Sequence  NVMEEYHAIFAERMIQHPAVQRICNTDYSAL
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Template Sequence  YFGDGTGVGLRKD. . . DTELKAAFDKALTEL
Template Known Secondary structure 
SSB


TT...
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   190.........200.. .......210.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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