Job Description P0A9G2 Confidence 99.60% Date Thu Jan 5 11:10:07 GMT 2012 Rank 35 Aligned Residues 199 % Identity 8% Template c3mz1D_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a possible transcription regulator protein2 from sinorhizobium meliloti 1021 Resolution 1.88 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	L	F	D	V	G	V	A	D	A	L	S	K	R	L	V	S	S	V	L	N	A	A	V	V	E	G	E	P	I	H	L	R	C	F	E	S	T	H	E	M	L	L	E	Q	L	S	Q	H	K	L	D	M	I	I	S	D	C	P	I	D	S	T	Q	Q	E	G	L	F	S	V	R	I	G	E	C	G	V	S
Query Conservation
Alig confidence																																										.	.	.
Template Conservation																																										.	.	.
Template Sequence		K	G	R	L	R	V	E	T	A	S	A	F	A	N	L	V	I	I	P	A	L	P	E	F	H	K	K	Y	P	D	I	Q	I	D	L	G	V	S	D	R	.	.	.	T	I	D	Y	L	A	E	N	V	D	C	A	I	R	A	G	T	L	T	D	Q	S	L	I	A	R	R	I	T	E	X	K	F	V	A	C	A
Template Known Secondary structure																	T													T	T											.	.	.		T	T				T	T								S					T	T	S
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		174	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		F	W	C	T	N	P	P	P	E	K	P	F	P	.	.	.	.	.	A	C	L	E	E	R	R	L	L	I	P	G	R	R	S	M	L	G	R	K	L	L	N	W	F	N	S	Q	G	L	N	V	E	I	L	G	E	F	D	D	A	A	L	M	K	A	F	G	A	M	H	N	A	I	F	V	A	P	T	L	Y	A
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		S	R	D	F	L	E	R	H	P	V	P	Q	H	P	S	D	L	E	K	N	C	Y	V	V	G	Y	F	L	P	K	T	G	Q	Q	X	P	F	H	F	R	R	G	N	E	E	I	E	V	S	G	R	Y	T	X	A	A	N	E	S	T	T	Y	L	A	A	A	R	A	G	L	G	V	I	Q	A	P	L	F	X	V
Template Known Secondary structure									S				S	S	G	G	G	G	G	T	T	S								T	T	T	T										T	T														S	S										T	T			B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		249	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		Y	D	F	Y	A	D	K	T	V	V	E	I	.	G	R	V	E	N	V	M	E	E	Y	H	A	I	F	A	E	R	M	I	Q	H	P	A	V	Q	R	I	C	N	T	D	Y	S	A	L
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		R	E	D	L	R	N	G	T	X	V	P	V	L	P	D	W	Q	V	E	P	X	P	I	Y	L	V	Y	P	P	N	R	H	L	S	S	R	L	R	V	F	A	D	W	V	V	K	V	X
Template Known Secondary structure								T	S						T	T		B												G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions