Job Description P0A9G2 Confidence 41.89% Date Thu Jan 5 11:10:07 GMT 2012 Rank 387 Aligned Residues 182 % Identity 10% Template c2v25B_ PDB info PDB header:receptor Chain: B: PDB Molecule:major cell-binding factor; PDBTitle: structure of the campylobacter jejuni antigen peb1a, an2 aspartate and glutamate receptor with bound aspartate Resolution 1.49 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		R	L	V	S	S	V	L	N	A	A	V	V	E	G	.	.	E	P	I	H	L	R	C	F	E	S	T	H	E	M	L	L	E	Q	L	S	Q	H	K	L	D	M	I	I	S	D	C	P	I	D	S	T	Q	Q	E	G	L	F	S	V	R	I	G	E	C	G	V	S	F	W	C	T	N	P	P	P	E	K	P	F
Query Conservation																.	.
Alig confidence																.	.																																.
Template Conservation																																																	.
Template Sequence		G	F	E	V	D	V	A	K	L	L	A	K	S	I	L	G	D	D	K	K	I	K	L	V	A	V	N	A	K	T	R	G	P	L	L	D	N	G	S	V	D	A	V	I	A	T	F	.	T	I	T	P	E	R	K	R	I	Y	N	F	S	E	P	Y	Y	Q	D	A	I	G	L	L	V	L	K	E	K	K	Y	K
Template Known Secondary structure		S															S		T	T	S								T	T	T							T	T	S		S				S	S		.	B							T	T					S		S											G	G	G
Template Predicted Secondary structure																																																	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	C	L	E	E	R	R	L	L	I	P	G	R	R	S	M	L	G	R	K	L	L	N	W	F	N	S	Q	G	L	N	V	E	I	L	G	E	F	D	D	A	A	L	M	K	A	F	G	A	M	H	N	A	I	F	V	A	P	T	L	Y	A	Y	D	F	Y	A	D	K	T	V	V	E	I	G	R	V	E	N
Query Conservation
Alig confidence																																																																									.	.
Template Conservation																																																																									.	.
Template Sequence		S	L	A	D	M	K	G	A	N	I	G	V	A	Q	A	A	T	T	K	K	A	I	G	E	A	A	K	K	I	G	I	D	V	K	F	S	E	F	P	D	Y	P	S	I	K	A	A	L	D	A	K	R	V	D	A	F	S	V	D	K	S	I	L	L	G	Y	V	D	D	K	S	.	.	E	I	L	P	D	S	F
Template Known Secondary structure		S	G	G	G	G	T	T							T	T		S													T									S	S										T	T	S	S	S										T	T	T			T	T		.	.				S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	E	E	Y	H	A	I	F	A	E	R	M	I	Q	H	P	A	V	Q	R	I	C	N	T	D	Y	S	A	L
Query Conservation
Alig confidence														.	.	.
Template Conservation														.	.	.
Template Sequence		E	P	Q	S	Y	G	I	V	T	K	K	D	.	.	.	D	P	A	F	A	K	Y	V	D	D	F	V	K	E	H
Template Known Secondary structure		S										T	T	.	.	.															T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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