Job Description P0A9G2 Confidence 99.46% Date Thu Jan 5 11:10:07 GMT 2012 Rank 37 Aligned Residues 182 % Identity 10% Template c2qsxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: crystal structure of putative transcriptional regulator lysr from2 vibrio parahaemolyticus Resolution 1.64 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	V	G	V	A	D	A	L	S	K	R	L	V	S	S	V	L	N	A	A	V	V	E	G	E	P	I	H	L	R	C	F	E	S	T	H	E	M	L	L	E	Q	L	S	Q	H	K	L	D	M	I	I	S	D	C	P	I	D	S	T	Q	Q	E	G	L	F	S	V	R	I	G	E	C	G	V	S	F	W	C
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		L	V	V	D	V	T	P	S	F	A	S	L	W	L	V	P	N	I	N	D	F	H	Q	R	H	P	N	I	R	V	K	I	L	T	G	D	.	.	.	.	.	.	.	G	A	V	G	E	S	D	L	H	V	R	C	L	P	L	S	T	H	Y	E	Y	S	Q	L	L	C	E	E	T	L	L	L	I	G	N	T	N
Template Known Secondary structure														T													T	T										.	.	.	.	.	.	.	S						S								S		S			T	T															T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	P	P	P	E	K	P	F	P	A	C	L	E	E	R	R	L	L	I	P	G	R	R	S	M	L	G	R	K	L	L	N	W	F	N	S	Q	G	L	N	V	E	I	L	G	E	F	D	D	A	A	L	M	K	A	F	G	A	M	H	N	A	I	F	V	A	P	T	L	Y	A	Y	D	F	Y	A	D	K	T
Query Conservation
Alig confidence				.	.	.	.	.	.																.	.	.																		.
Template Conservation				.	.	.	.	.	.																.	.	.																		.
Template Sequence		L	P	.	.	.	.	.	.	K	N	Q	A	I	S	H	Y	P	F	I	P	Q	T	T	.	.	.	R	P	Q	L	W	E	Q	F	K	Q	E	N	D	I	T	Y	H	.	S	V	G	F	E	H	F	Y	L	A	C	E	A	V	R	X	E	K	G	L	A	L	L	P	D	F	X	A	Q	F	S	I	L	R	G	D
Template Known Secondary structure		S		.	.	.	.	.	.				G	G	G	G	S		B			B	T	T	.	.	.		T														B		.	S			B	S	S										T	T			B														T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.																.	.	.																		.
Template SS confidence
		95	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		257	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	V	E	I	.	G	R	V	E	N	V	M	E	E	Y	H	A	I	F	A	E	R	M	I	Q	H	P	A	V	Q	R	I	C	N	T	D	Y	S	A	L
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		I	Q	H	I	G	N	L	K	L	H	S	G	Y	G	Y	Y	V	V	I	P	N	F	R	L	T	S	R	K	V	A	L	F	H	D	W	L	K	D	K	L
Template Known Secondary structure																						G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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