 |
Job Description | P0A9G2 | Confidence | 92.68% | Date | Thu Jan 5 11:10:07 GMT 2012 |
Rank | 182 | Aligned Residues | 68 |
% Identity | 21% | Template | c1stzB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:heat-inducible transcription repressor hrca homolog; |
PDBTitle: crystal structure of a hypothetical protein at 2.2 a resolution
|
Resolution | 2.20 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | M | S | H | I | N | Y | N | H | L | Y | Y | F | W | H | V | Y | K | E | . |
. |
. |
. |
. |
. |
. |
. |
G | S | V | V | G | A | A | E | . |
A | L | Y | L | T | P | Q | T | I | T | G | Q | I | R | A | L | E | E | R | L | Q | G | K | L | F | K | R | K | G | R | G | L | E | P | S | E | L | G | E | L | V | Y |
Query Conservation |   |
  |
|   |   |
|   |
|   |   |
|   |   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |
|   |
|   |
|
|   | . |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
| . |   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
Template Sequence |   |
A | L | K | K | L | N | D | R | Q | R | K | V | L | Y | C | I | V | R | E | Y | I | E | N | K | K | P | V | S | S | Q | R | V | L | E | V | S | N | I | E | F | S | S | A | T | I | R | N | D | M | K | K | L | E | . |
Y | L | G | Y | I | Y | Q | P | H | T | S | A | G | R | I | P | T | D | K | G | L | R | F | Y |
Template Known Secondary structure |   |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
| B |
|  |  |  |  |  |  |  | S |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | . |  | T | T | S |  |  |
|
| S | S |
| S |
| B |  |  |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|