Job Description P0AD96 Confidence 32.46% Date Thu Jan 5 11:20:22 GMT 2012 Rank 194 Aligned Residues 104 % Identity 18% Template c3r0jA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis Resolution 2.50 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		K	P	Q	R	I	A	I	V	H	D	K	Q	Q	Y	G	E	G	L	A	R	A	V	Q	D	G	L	K	K	G	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	T	L	V	A	R	L	K	K	E	N	I	D	F	V	Y	Y	.	G	G	Y	H	P	E	M	G	Q	I	L	R	Q	A	R	A
Query Conservation																																																																	.
Alig confidence													.	.	.	.																							.	.	.	.	.	.	.																				.
Template Conservation													.	.	.	.																							.	.	.	.	.	.	.
Template Sequence		P	E	A	R	V	L	V	V	D	D	E	.	.	.	.	A	N	I	V	E	L	L	S	V	S	L	K	F	Q	G	F	E	V	Y	T	A	T	.	.	.	.	.	.	.	N	G	A	Q	A	L	D	R	A	R	E	T	R	P	D	A	V	I	L	D	V	X	P	G	X	D	G	F	G	V	L	R	R	L	R	A
Template Known Secondary structure		S	S								S		.	.	.	.														T	T							S	.	.	.	.	.	.	.	S														S									S	S
Template Predicted Secondary structure													.	.	.	.																							.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	K	T	Q	F	M	G	P	E	G	V	A	N	V	S	L	S	N	I	A	G	E	S	A	E	G	L	L	V	T	K	P	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	I	D	A	P	A	L	F	L	T	A	R	D	S	L	Q	D	K	I	A	G	L	T	L	G	G	D	D	Y	V	T	K	P	F	S
Template Known Secondary structure		T	T											S	T	T									T	S	T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions