Job Description P0AD96 Confidence 100.00% Date Thu Jan 5 11:20:22 GMT 2012 Rank 11 Aligned Residues 341 % Identity 20% Template c3i45A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of putative twin-arginine translocation pathway2 signal protein from rhodospirillum rubrum atcc 11170 Resolution 1.36 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.																															.
Query SS confidence																																										.																															.
Query Sequence		L	A	E	D	I	K	V	A	V	V	G	A	M	S	G	P	V	A	Q	Y	G	D	Q	E	F	T	G	A	E	Q	A	V	A	D	I	N	A	K	G	G	.	I	K	G	N	K	L	Q	I	V	K	Y	D	D	A	C	D	P	K	Q	A	V	A	V	A	N	K	V	V	N	D	.	G	I	K	Y	V	I	G	H
Query Conservation																																										.																															.
Alig confidence																				.																						.																															.
Template Conservation																				.
Template Sequence		S	L	E	A	I	R	I	G	E	I	N	S	Y	S	Q	I	P	A	.	F	T	L	P	Y	R	N	G	W	Q	L	A	V	E	Q	I	N	A	A	G	G	L	L	G	G	R	P	L	E	V	I	S	R	D	D	G	G	D	P	G	K	A	V	T	A	A	Q	E	L	L	T	R	H	G	V	H	A	L	A	G	T
Template Known Secondary structure														T	T	T				.																			T	T		B	T	T	T	B										T	T																			S
Template Predicted Secondary structure																				.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		L	C	S	S	S	T	Q	P	A	S	D	I	Y	E	D	E	G	I	L	M	I	T	P	A	A	T	A	P	E	L	T	.	A	R	G	Y	Q	L	I	L	R	T	T	G	L	D	S	D	Q	G	P	T	A	A	K	Y	I	L	E	K	V	K	P	Q	R	I	A	I	V	H	D	K	Q	Q	Y	G	E	G	L	A
Query Conservation																																	.
Alig confidence																																	.																													.
Template Conservation																																																														.
Template Sequence		F	L	S	H	V	G	L	A	V	S	D	F	A	R	Q	R	K	V	L	F	M	A	S	E	P	L	T	D	A	L	T	W	E	K	G	N	R	Y	T	Y	R	L	R	P	S	T	Y	M	Q	A	A	M	L	A	A	E	A	A	K	L	.	P	I	T	R	W	A	T	I	A	P	N	Y	E	Y	G	Q	S	A	V
Template Known Secondary structure			S															T							S				G	G	G	T	T	T	T			T	T					S															T	T	S	.	S										S	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure														.	.																																																							.	.
Query SS confidence														.	.																																																							.	.
Query Sequence		R	A	V	Q	D	G	L	K	K	G	N	A	.	.	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	T	L	V	A	R	L	K	K	E	N	I	D	F	V	Y	Y	G	G	Y	H	P	E	M	G	Q	I	L	R	Q	A	R	A	A	G	L	K	T	Q	.	.	F	M	G	P	E	G	V	A	N	V
Query Conservation														.	.																																																							.	.
Alig confidence														.	.																																																							.	.
Template Conservation
Template Sequence		A	R	F	K	E	L	L	L	A	A	R	P	E	V	T	F	V	A	E	Q	W	P	A	L	Y	K	L	D	A	G	P	T	V	Q	A	L	Q	Q	A	E	P	E	G	L	F	N	V	L	F	G	A	D	L	P	K	F	V	R	E	G	R	V	R	G	L	F	A	G	R	Q	V	V	S	M	L	T	G	E	P	E
Template Known Secondary structure													T	T											T	T														T			S								T	T													T	S	S	T	T										S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																								.																																											.	.
Query SS confidence																								.																																											.	.
Query Sequence		S	L	S	N	I	A	G	E	S	A	E	G	L	L	V	T	K	P	K	N	Y	D	.	Q	V	P	A	N	K	P	I	V	D	A	I	K	A	K	K	Q	D	P	S	G	A	F	V	W	T	T	Y	A	A	L	Q	S	L	Q	A	G	L	N	Q	S	D	.	.	D	P	A	E	I	A	K	Y	L	K	A	N	S
Query Conservation																								.																																											.	.
Alig confidence																								.																																											.	.
Template Conservation
Template Sequence		Y	L	N	P	L	K	D	E	A	P	E	G	W	I	V	T	G	Y	P	W	Y	D	I	D	T	A	P	H	R	A	F	V	E	A	Y	R	A	R	W	K	E	D	P	F	V	G	S	L	V	G	Y	N	T	L	T	A	M	A	V	A	F	E	K	A	G	G	T	E	S	E	T	L	V	E	T	L	K	D	M	A
Template Known Secondary structure				G	G	G	G	G	G			S	S								G	G	G																		S	S																								T	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		V	D	T	V	M	G	P	L	T	W	D	E	K	G	D	L	K	G	F	E	F	G	V	F	D	W	H	.	A	N	G	T	A	T
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		F	S	T	P	M	G	P	L	S	F	R	A	S	D	H	Q	S	T	M	G	A	W	V	G	R	T	A	L	R	D	G	K	G	V
Template Known Secondary structure					T	T					B		T	T	T		B	B													T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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